KEGG   Python bivittatus (Burmese python): 103061412Help
Entry
103061412         CDS       T03091                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
pbi  Python bivittatus (Burmese python)
Brite
KEGG Orthology (KO) [BR:pbi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:pbi01009]
    103061412 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:pbi03019]
    103061412 (HDAC6)
   04131 Membrane trafficking [BR:pbi04131]
    103061412 (HDAC6)
   03036 Chromosome and associated proteins [BR:pbi03036]
    103061412 (HDAC6)
Enzymes [BR:pbi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103061412 (HDAC6)
Protein phosphatases and associated proteins [BR:pbi01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103061412 (HDAC6)
Messenger RNA biogenesis [BR:pbi03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103061412 (HDAC6)
Membrane trafficking [BR:pbi04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    103061412 (HDAC6)
Chromosome and associated proteins [BR:pbi03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103061412 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 103061412
NCBI-ProteinID: XP_007422273
LinkDB All DBs
Position
Unknown
AA seq 1140 aa AA seqDB search
MVSLAEGAWPRGDSIRQRPGRDRHWTWEARARRSVAPGLEEAVPLPPTMASDLGNASVLD
PLSVPALKIQAPLKKANRKGGLPEAKRKGRAKRLNKDAEDLLLGLQRLDLTTECAAPTGT
GLIWDKRMTEFCCPWDKSFPECPERLVTIQDKLLQYELLERCVPIMGREVSEEEILLAHS
QEYLTLMKSTETMSETELRSLADTFDSVYLHPNFYRCACLAAGSVLQLVEKVWSGELRNG
LAVVRPPGHHAHRYKMDGYCMFNNIGIAAQYARQKLGVERVLIVDWDVHHGQGLQYLFEE
NPSILYFSIHRYEGGNFWPHLPESDSHAVGRGRGEGYNINVPWNQTGMRDADYLSAFLHV
LLPVALEFQPQMILVAAGFDAVIGDVKGEMAATPACFAQLTHLLMSLSGGKLVLSLEGGY
NLQTLAEGTCMVLKTLLGDPCPLMESPFLPCSSALSSVSQTIAVHSKYWKNLRRISADVP
QENGKVSVAWPPASHLSVADALSRSAAELMQPRPPSCTGLVYDEKMMEHYNMWDSQHPEL
PQRVSRIFQRHGELHLTERCCRLPARLASEEELQMCHSLAYVETVKSTATMKPRDLHRQG
DQYNSVYICASSYECARLAAGSAFSAVEAVLSGKTQNAVAIVRPPGHHAESDTACGFCFF
NSVALAARYAQRFAGRSMRVLILDWDVHHGNGTQHMFEDDPSVLYISLHRYDNGTFFPTS
EDADYDRVGVGPGEGFTLNVPWNCSRMGDSEYLAAFHQIVMPVSYEFNPELVLVSAGFDA
ARGDPLGGCLVTPECYAHMTHFLLGLAGGKVAVVLEGGYNLESISESMTMCTRSLLGDPP
PPLGRLKPPHLSALQSLARVAAVHRKYWMSLRLEVPATLWEKPRTRAGKETPIPNEVPEQ
APQELLQSPVAQPVEAIEDAMAGLGSLQLEDNLMEEGETASSSLSPDSSPVGEEGQPKVG
GSPKEVDSAEGAPREGMPAEGFSGEVTAPDKEAEVSLQLHPPVLLDEATGGAPSFDEQLG
EDMADSGLFYAVTPLTWCPHLSSVLPVPPVGLDVLEPCAECGSKMENWVCLVCYKVCCGR
YINQHMLDHNKESGHPLVLSFADLSAWCYGCQAYIHHPVLLEAKCQAHKLKFGVDMHLPS
NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt
atggtttccctcgcagagggggcgtggccccgaggtgacagcatcaggcagcgccctggg
agagaccggcactggacgtgggaagcgcgtgcccggcggtccgtagcgccaggattggag
gaggcagtacctcttcccccaacaatggcttctgatttgggaaatgcctcagtgttggat
cccttatctgtgcctgctttgaagattcaggctccattgaaaaaagctaaccgaaaggga
gggcttccagaggccaagcggaaaggacgggcaaaaagattgaacaaagatgctgaggat
ctgctcttgggcctgcagcgactggatctcactacagaatgtgctgctcccacgggaact
ggactgatttgggataaacggatgacagaattttgctgcccatgggataaaagtttccca
gaatgcccagagcggctggtgaccattcaggacaaactacttcaatatgaactgttggag
cgttgtgtcccaataatgggccgagaagtttctgaggaggagatcctcttggctcacagt
caggagtacttgacactcatgaaatcgaccgaaacaatgagtgagactgagttaaggtct
ctggcagatacctttgattctgtttacctgcatccaaatttctaccgctgtgcctgcctt
gctgctggttctgtcttgcaacttgtggagaaagtgtggtctggggaactccgtaatggc
ctggctgtggtcaggccccctggacaccatgctcaccgctacaagatggatggctactgc
atgttcaacaacataggcattgcagcacaatatgcccgacagaaattgggggtggagcgg
gtgcttattgttgactgggatgtgcatcatgggcaaggccttcagtacctctttgaggag
aatcccagcatcctttatttctccatccatcgctatgaaggaggaaatttctggccccat
cttccagaatctgacagtcatgcagtgggcagaggtcggggagagggctacaacatcaat
gtgccctggaaccagacaggaatgagggatgctgactacctctctgcctttttacatgtc
ctactgcctgtggccttagagttccaaccccagatgatcctggttgctgctggttttgat
gctgtaattggtgatgttaagggggagatggctgccaccccagcatgctttgctcagctg
acacatctgttaatgtcgctgtctggaggcaagctggttttgtctctggagggtgggtat
aatctccagaccttggcagagggaacctgcatggtccttaagactctcctaggagatccc
tgtccactgatggaatcacctttcctcccatgtagcagtgccctcagctcagtgtctcag
accattgcagttcatagcaagtattggaagaacctacggaggatcagtgctgatgtgccc
caggagaatggcaaggttagtgtagcttggccaccagccagccatctgtctgtagctgat
gccctctccaggtcagcagctgaactgatgcagccccggcccccttcttgcacagggcta
gtctatgatgagaagatgatggagcattacaatatgtgggacagccaacatccagagctg
cctcagagagtctccaggatcttccagcgccatggggagctgcatctgacagagcggtgc
tgccggctcccagcccgccttgcctctgaagaggagctacaaatgtgccacagcctggct
tatgtggagacagtgaagtccacagccaccatgaagccccgtgacctgcatcgccagggc
gaccagtacaattctgtctatatctgtgccagctcctatgagtgtgcccggctggcagcc
gggtctgcattcagtgcagtagaggctgtactttctgggaagactcaaaatgctgtggcc
attgtccgccctcctggacaccatgctgaatcagatactgcctgtggcttctgcttcttc
aattctgtggctttggcagcacgatatgcccagcgctttgctggccggagcatgagggtg
ttgatactagactgggatgttcaccatggcaatgggacgcagcacatgtttgaagatgat
cccagtgttctgtatatctccctccatcgctatgacaatggcactttcttccccacttct
gaggatgcagactatgaccgggtgggtgtggggcctggtgaaggcttcacccttaatgtg
ccttggaactgttcccgcatgggagactctgagtatctggctgccttccatcagattgtc
atgcctgttagctatgagttcaatccagagctggtcctggtgtcggctggttttgatgct
gcccgaggggacccgttgggagggtgtctcgtgaccccagaatgctatgcccatatgacc
cacttcctcttgggcttggcaggagggaaggtagccgttgtcctagagggtggctataac
ctagaatctatctcagagtccatgaccatgtgtacccgcagcctcctgggggatcctcca
cctccactgggacgcctaaagcccccccacctgagcgccctgcagtccttggcccgtgtt
gctgctgtgcaccgcaaatattggatgagcctccgactagaagtacctgctactctgtgg
gagaagcccaggacccgggctgggaaggaaactcccattccaaatgaggttcctgaacaa
gcccctcaagagttgctccaaagccctgtagctcaacctgtggaagctatagaagatgct
atggcgggcttgggctccctccagctagaagacaatctcatggaagagggcgaaacagct
tcgagttctctctctcctgactctagtccagtgggtgaggaaggtcagccaaaagttggt
ggctcccctaaagaagtggattcagcagagggtgcaccaagagaaggcatgccggcggag
ggcttctctggtgaagtgacagctcctgacaaagaggcagaagtgagcttgcaacttcac
ccccctgtcctgctggatgaagcaacagggggcgctccttcctttgatgagcagcttggg
gaagatatggctgacagtgggctgttttatgcggtgactcccttaacctggtgcccccac
ctcagctcggtgctgcctgtgcctcctgtgggcttggacgtgctggagccttgtgcagaa
tgtggcagcaagatggagaactgggtttgtctggtgtgctataaggtctgttgtggccgc
tacattaatcaacatatgctggatcacaataaggaatctgggcacccgctggtgcttagc
tttgcagatctctctgcctggtgctatggctgccaagcctacatccatcacccagtcctt
cttgaagccaagtgccaggcccacaagctgaagtttggagtggacatgcacctgccttcc
taa

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