Python bivittatus (Burmese python): 103064210
Help
Entry
103064210 CDS
T03091
Symbol
COL27A1
Name
(RefSeq) collagen alpha-1(XXVII) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103064210 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbi00536
]
103064210 (COL27A1)
Glycosaminoglycan binding proteins [BR:
pbi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103064210 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103064210
NCBI-ProteinID:
XP_025024496
UniProt:
A0A9F5J460
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
GFPLLWTVFCLTCFLGFTHGNPEDVDVLQRLGLLGPRTSDLSHSVPQGVVPFKFGVILTQ
QARVKVPLSSVIPMPIGPDMTIVLSLCSHRVNSAFLFTIKSKRKKLQLGVQFLPNKVVVY
VGHKRSVYFDYNVHDGQWHNLAIDIRSKTVSLITACGKERVHADLYYKKDKTLDPAGSFL
LGKLNQHSVQFEGALCQFDIYLSTKAAHDYCKYLKKQCRQVDTFQPSILPFSPLLSKDPR
ASEMTPKQLELSVMGLMNLTTMHSPSTLFKTTTSQRDRRLQAAPTTVRTPKAPSATPTVK
MRTVVTLSPSRTEAQQHTSILQQTATVAHPTSRTAHRTTTAVLGGSHSTSSVEKPLLSSR
PNVLAFPNSTVNFGMIPDKQEIRKASRKPISQGPAIRSSQLPSTTKPMMKNRGNSSGSHS
PVTTKHKLEKVTSGPAPKEVMNLPAVKKSSPTIAAVLYTKPVLGDAYPVYQTDGQNSNLI
TLAATDGYQDFNPMGPTLFPFVMGLPGWKGDPGPPGPPGLPGILGLPGKRGPRGPPGPHG
NPGRPGPPGAKGQKGDPGLSPGKAWNGQKGNEGLPGLTGLPGSPGRKGQKGYLGPTGHPG
DPGERGADGNPGAKGYPGRQGLPGPIGEPGPKGSRGYIGPPGLLGMPGADGERGIPGVPG
KKGKMGRPGFPGDLGECGPPGIDGDPGDLGALGPPGVPGLLGDIGVLGEMGFPGPKGLKG
LMGNPGEHGLKGDKGEEGTSGIPGDIGFQGDKGSQGLPGITGLRGKPGPMGKVGDKGPVG
IPGPPGPEGFPGSIGPPGENGPEGIKGKPGARGLPGPRGTPGQEGDEGPAGPYGPPGEEG
PHGQKGFPGKPGPEGLKGEPGNRGQPGKTGDEGLIGFIGPIGEPGSVGEKGDRGTVGSPG
PTGIKGSMGHPGISGEVGAPGPPGPAGPPGARGSPGIRGPKGRRGARGLDGTVGEAGPQG
PKGLPGHPGKPGPDGQEGKIGEIGESGSRGFPGIQGSSGPQGAKGPPGELGPQGPPGPPG
LLGEIGHMGPPGATGLRGLPGEPGMKGDLGPLGVPGEQGLTGQRGEPGLEGDNGPVGPDG
FKGDKGQAGLEGEHGDKGQGGVQGKEGPPGDPGTTGVRGPEGKPGQQGERGKTGFKGSKG
HEGQLGETGPPGPMGSKGTQGPKGSRGTLGPTGVPGQMGVQGEMGLKGYQGHTGSPGPIG
LPGAKGEKGEQGDDGKMEGRPGPPGERGPIGNQGDRGESGDPGYPGQEGLDGERGKPGQQ
GLPGHPGPPGPPGPKGSKGSLGQKGKQGLQGARGSRGSPGSLGLPGPRGVIGREGQEGAP
GIDGIPGNDGRSGQKGEQGEDGEEGTPGMLGKRGNFGVPGLPGAQGPTGFKGERGLLGQA
GPLGKRGPQGGMGLPGSSGDPGPKGQPGDFGEPGFPGIAGLFGPKGPPGDLGFKGIQGPK
GPPGQWGKEGVIGPLGILGPPGNSGPKGEKGSRGETGLQGPRGSPGPQGSPGLPGPPGIQ
AAFRQDDVDAGFHSVMSASAVFRSEGHQQMDLPVIDQEGEIFKTLHYLSGLIQSIKRPMG
TKENPTRICRDLMNCEQKMQDGMYWIDPNLGCSSDSIPVTCNFTQGGQTCLNPITASKLD
FDIGRVQMNFLHLLSSEVVQNITIHCLNMPVWPEGPSEGAAIRFKAWNGQIFEQGGKLTP
DVVVNNCKTQDGQWHYTLFTFRTHDIQRLPIVGVYNLPPSRPGKEYLLEVGPVCFL
NT seq
5212 nt
NT seq
+upstream
nt +downstream
nt
gggattccctcttctctggacggttttctgtttgacttgcttccttggattcacacatgg
aaatcctgaagatgtggatgtccttcagaggctgggcctgctggggccaaggacctcgga
cttgtcacactctgttcctcagggagttgtccccttcaagtttggagtcatcctcaccca
gcaggcacgtgtcaaggtgcccctcagctcagttattcccatgcccattggcccagacat
gactatcgtgttaagcctgtgctcccatcgtgtcaacagcgcctttttattcactataaa
gagtaaaaggaagaaattacaactgggtgttcagtttcttcctaataaggttgtcgtcta
cgtaggtcacaagcgctctgtatattttgattacaatgttcatgacgggcaatggcataa
tcttgctattgatatccgaagcaaaacagtctccttgattaccgcttgcgggaaagaaag
ggtacatgcagatttgtattataaaaaagataagacgttggatccggccgggtctttcct
cttgggaaagctcaatcagcactcagtccagtttgaaggcgccctgtgccagtttgatat
ttatctttccaccaaggcagctcatgattactgtaagtatctgaaaaaacaatgcagaca
agtggatacctttcagccaagcatcctgcccttttctccattgctgtccaaagatccaag
agcttctgaaatgactccaaagcagttggaactttcagtgatgggcttgatgaacctgac
cactatgcattctccatcgacgctcttcaagaccaccacttctcagagggacaggaggtt
gcaggcagcacccaccactgttagaactcctaaggcaccatctgcaaccccaaccgtaaa
gatgaggaccgtcgtgacattgtctccctctcgaacagaagcacagcaacacaccagtat
tctccagcagacggccacagtggcacatccgacttccagaacagctcaccggactaccac
cgcagttctaggtgggtctcactccacttccagtgtggagaaacctcttttatcatcccg
cccgaacgttcttgccttcccaaactcaactgtgaactttggcatgattcctgataagca
agagattcggaaagcatccagaaagccaattagccaaggaccagccatcaggtcctctca
gttaccaagtaccacaaagccaatgatgaagaacaggggcaactcatcaggtagtcattc
tccagtcaccacaaagcacaagctggaaaaggtcaccagtggccctgcaccaaaggaggt
aatgaacctgccagcagtgaagaaatccagtcctaccattgctgctgtcttgtataccaa
accagtgcttggagatgcttatcctgtttatcaaacagatggacaaaactcaaatttaat
cactctggctgctacagatggctatcaggactttaaccctatggggcccaccctattccc
atttgttatgggtcttccaggatggaaaggagatccaggtcctccgggtccccctggtct
gcctgggatcctgggccttcctggcaagcgaggaccacggggacctcctggcccccatgg
aaaccctggccgccctggaccacctggtgcaaagggccagaaaggggatcctggactatc
acctggaaaagcatggaatggtcagaagggcaatgagggcttacctgggttgacaggact
tcctggatcacctggtaggaagggacagaaaggatatctgggtccaactggccatcctgg
agacccgggtgaacgaggagccgacgggaatccaggagccaaaggttatcctggcaggca
gggattacctggacctataggggaacctggaccaaaagggagccgggggtacattggccc
accaggattgctggggatgccaggggctgatggggaaaggggaatccccggagttcctgg
gaagaagggcaagatgggtaggccgggttttccgggcgatttgggggaatgtggaccacc
aggtatagatggcgacccgggagacctgggagccctcggtccccctggagtccccggcct
ccttggtgatataggtgtccttggagaaatgggcttcccaggacccaaaggactaaaggg
gttgatgggaaatcctggagaacatggactgaaaggtgataagggtgaggaaggcacgtc
gggcattcctggagacatcggtttccaaggggacaagggtagccaagggttgcctgggat
cacaggattacgaggaaagccaggcccaatgggaaaggttggtgacaaaggtccagttgg
aattccagggccacctggcccagagggcttcccaggcagcatcgggcccccaggagaaaa
cggccccgaaggtattaagggaaagcctggcgcaaggggcttgcctggtcccagaggaac
gcctggccaagagggcgatgaagggccagcgggcccctacggtcctccaggggaagaggg
tccccacggccaaaaggggtttcctggcaaaccgggcccggagggcttaaagggtgaacc
agggaatcgaggacagccggggaaaactggcgatgagggtctgataggtttcatcggtcc
aataggggagcctggaagtgtcggggagaagggggaccggggcacagttggatcaccagg
accgacaggcatcaaggggtcgatgggccatcctggaatttcaggagaagttggagcacc
cggcccccctggaccagcagggccaccaggagctcgtggctcaccaggaataagaggccc
caaaggtcgccggggcgctcgaggtcttgatggaacagtgggtgaagcagggccccaagg
tcccaagggcctcccgggacatccaggtaaaccaggaccggatggtcaagagggaaagat
cggtgaaatcggagagtctggttctcgtggcttccctggcatccaaggatcttctggacc
acaaggagcaaaagggcctccaggagagttgggacctcaaggcccaccaggcccaccagg
ccttttgggagaaattggacatatgggaccacctggtgcaacagggctgcgaggacttcc
aggggaacctggcatgaagggtgaccttggtccacttggggttcctggagagcaaggact
gactggtcaacggggagagccaggccttgaaggagacaatggcccagtagggccagatgg
attcaagggagacaaaggacaagcaggcctggaaggagagcatggggacaaggggcaggg
aggggtccaaggaaaagaaggaccccctggcgatcctggaaccacaggcgtccgaggccc
agaaggaaaaccagggcaacaaggagaaaggggcaaaactggatttaagggcagcaaagg
ccatgagggacaacttggagagactggcccaccaggaccgatgggctcaaaggggactca
aggccccaaaggatcgagaggtactcttggaccaacgggagttcctggccaaatgggtgt
ccaaggagagatgggattaaaaggctatcagggacacacaggatcaccaggccccatcgg
tctccctggggctaagggggaaaagggagaacaaggcgatgatgggaagatggaaggacg
ccctggaccccctggagagagaggtcccattggcaaccagggagatcgtggggagtctgg
agaccctggttatcctggccaggaaggactggatggagaacgaggaaaacctgggcagca
aggtttgcctggacacccaggacccccaggacccccaggaccgaaaggatccaaaggcag
tctgggccaaaaaggaaaacaggggctgcagggtgccagagggagccgagggtcaccggg
ttcacttggcctgccaggtccccgaggagtcattgggcgagagggacaagagggcgctcc
tggaattgatgggattcctgggaatgacggccgcagtgggcaaaaaggtgaacaaggtga
ggacggggaagaagggaccccaggaatgctagggaaaagagggaactttggagtccctgg
gttacctggagcacaaggccccacaggatttaagggagaaagaggtttgcttggacaggc
tggtccattggggaaaagaggccctcaaggtggaatgggactccctggaagctccggtga
tccagggcccaaagggcagccgggagactttggtgaaccaggatttccagggattgctgg
actgtttggcccaaagggaccacctggagatcttggcttcaaaggcatccagggcccgaa
agggcccccaggacagtggggcaaagaaggtgttattggcccacttgggattctaggtcc
accaggaaactctggccctaaaggagaaaaaggcagccgaggtgaaacgggtctccaagg
tccaaggggttcccccgggccccaaggatctcctggccttccgggcccaccaggaattca
agctgcattccggcaagatgatgttgatgcaggttttcactccgtgatgagtgccagtgc
tgtgttcaggtctgagggccatcaacagatggatcttccagtgatagaccaggaagggga
gatctttaagactctgcactacctcagtggcctcatccagagcatcaagagacccatggg
aacaaaggagaaccctacccgcatttgtagagacctcatgaactgtgaacaaaagatgca
ggatggcatgtactggattgacccaaaccttggctgttcttcagatagcattccggtcac
ctgtaacttcacccaagggggtcagacttgtctcaaccctatcacagcatcaaagctgga
cttcgatattggaagagtacaaatgaatttccttcatctcttgagctctgaagttgttca
gaacatcaccatccattgcttgaacatgccagtctggccggaaggaccatcagaaggggc
tgccatacgcttcaaggcttggaacgggcagatctttgaacagggcgggaagctcacgcc
agatgttgtggtgaacaattgtaagactcaagacggccagtggcattacacgctctttac
gttccggacgcacgacatccagcggctgccgatcgtcggtgtctataaccttccgccaag
caggccggggaaggaatatctccttgaggttgggccagtgtgtttcctctag
DBGET
integrated database retrieval system