KEGG   Python bivittatus (Burmese python): 103064233Help
Entry
103064233         CDS       T03091                                 

Gene name
LIG1
Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pbi  Python bivittatus (Burmese python)
Pathway
pbi03030  DNA replication
pbi03410  Base excision repair
pbi03420  Nucleotide excision repair
pbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbi00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    103064233 (LIG1)
   03410 Base excision repair
    103064233 (LIG1)
   03420 Nucleotide excision repair
    103064233 (LIG1)
   03430 Mismatch repair
    103064233 (LIG1)
Enzymes [BR:pbi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103064233 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     103064233 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     103064233 (LIG1)
DNA replication proteins [BR:pbi03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    103064233 (LIG1)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     103064233 (LIG1)
DNA repair and recombination proteins [BR:pbi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     103064233 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     103064233 (LIG1)
   MMR (mismatch exicision repair)
    Other MMR factors
     103064233 (LIG1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DDR
Motif
Other DBs
NCBI-GeneID: 103064233
NCBI-ProteinID: XP_007437575
LinkDB All DBs
Position
Un
AA seq 912 aa AA seqDB search
MQSNIRSFFQPLARIKPEKEKAEDNHLEDVLTSQKKLVNGSEVYEDFPVNSASKKAAKVL
NSDDEEDSVELDGKDTQADDSKLEPDCVPEQKISEESISPSTSPTTSSSPTSSGIPRRKT
ARKQLPKRKPEEDVNSHNNSHESRSTKRWKEDHSRDDSKDENGEKSMEVEEVKSENAKLV
EHKTDRNVKEEETSDSPKSSSKPISSFFAPKKSSVKTEKKQAPIVSENMPVPKDLNKVSN
HESNSMADNFLKPSLTPEPPEYNPTKSSYHPVHDACWGPGQKVPYMAVARSFEYIEEESA
RLKIIETLSNLFRSVIVLSPQDLLPCVYLCLNRLGPAYEGLELGIGKTILMKALAQATGR
QLDQIKAEAAEKGDLGLVAENSRTTQGTVFAPPKLGAAAVFGKLQAIGHMAGSSSMNKKI
DIIKSLFVACRHSEARYVARSLEGKLRIGLAEQSVLSALAQAASLTPPGQKFPPDVLDAA
KGKSVETRKAWLDERALIVKQAFCELPNYDIIIPVLLEHGVESLPQHCKITPGIPLKPML
AHPTKGIGEVLKRFEEAAFTCEYKYDGERAQIHILENGEVHIYSRNQENNTTKYPDIVTR
IPKVKNSTVKSCILDAEAVAWDPVSKQILPFQVLTTRKRKDVDAAEIRVQVCVYAFDMLY
LNGMSLVQKPLSQRRTLLHNSFTEVEGQFLFATSMDTSNTDEIAEFLERSIKDSCEGLMV
KTLEVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRAGTYGGFLLACYD
EESEEFQSICKIGTGFTDEDLEKLHLSLKDCVTPQPRPYYRWGGTAEPDHWLEAQYVWEV
KCADLSISPIHRAASGLVDEEKGISLRFPRFLRIRDDKKPEEATSSAQVAELYRKQQQIQ
NQVSLEKDDDFY
NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt
atgcagagcaacataagatcattcttccagcctctggcacgaataaagcctgaaaaagaa
aaagcagaagacaaccacttggaagatgtgctcacttcacaaaagaaattagtaaatggt
tcagaagtctatgaagacttcccagtgaattctgcatctaaaaaagctgccaaggtactt
aatagtgatgatgaagaggattctgtggaattagatggaaaggatacacaagcagatgac
agcaagttggaacctgactgtgttcctgagcaaaagatctctgaggagagcatctctcca
agtaccagcccaactacctccagttcacccacatcttctggtattccaaggcgcaaaact
gcccgcaagcagctccctaaacgtaaaccagaggaagatgtcaacagccataataattcc
catgaaagtcgcagtaccaaaagatggaaggaagatcacagtagagatgattctaaagat
gaaaacggtgagaaatccatggaagtggaagaagtgaaaagtgaaaatgcaaaattggtg
gagcataaaacagacagaaatgtaaaggaagaagaaacctcagattcccctaagtcatct
agcaagcccatttctagtttttttgctcccaagaaaagttctgtgaagacagaaaaaaag
caagcacctatagtatcagaaaacatgccagtaccaaaggaccttaataaagttagtaat
catgagtccaacagcatggctgacaattttctcaagccatctcttacacctgaacctcca
gagtacaaccctacgaagagcagctatcatcctgttcatgatgcttgctggggccctggc
caaaaggtaccatacatggctgtggctcgttcttttgagtatattgaggaggaatctgcc
cggttgaaaattatagagaccctgagcaatctctttcgttctgtgattgtcctgtctcca
caagacctgctcccctgtgtctacctctgtctcaatcggttaggcccagcgtatgaaggc
ctagaattaggcattggcaaaaccatcctcatgaaagcgctggcccaagccacaggtcgg
caactggaccaaatcaaggcagaggcagcagagaagggagatctaggattagttgctgaa
aacagtcgcacaacacaaggaaccgtgtttgccccacccaagcttggtgctgctgctgtc
tttggcaaactgcaggcaattgggcacatggcaggaagctcttctatgaacaagaaaatt
gacattatcaagtctctgttcgttgcatgtcgccactcagaggctcgttatgttgctcgg
tcattagaaggaaagttacggattgggctagcagagcagtctgtcctctcagctcttgcc
caggcagcatcgctcactcccccaggacaaaaatttcccccagatgttttggatgctgca
aagggcaaatctgtagaaacacgcaaagcctggctggatgagagagccttgattgttaag
caggccttctgtgaactgccaaattatgacatcatcatacctgtcctcttggagcatggt
gtggagagcttgcctcagcactgcaagatcactccagggattcccctgaagcccatgctg
gctcatccaaccaaaggaattggggaggtattaaagcgctttgaagaggcagccttcact
tgtgaatacaaatatgatggggagcgggcacagatccacattctagagaatggagaagta
catatttatagccgaaaccaagagaacaacacaacaaagtaccctgatattgtcacccgt
attcccaaggtgaaaaacagcactgtgaagtcatgcatcttggatgcagaggcagtggcc
tgggaccctgtttcaaaacagatcctgccattccaagtattgaccacccgcaagcgcaag
gatgtggatgctgcagaaatccgagtgcaggtttgtgtgtatgcattcgacatgctctac
cttaatggaatgtctctagtccagaaacctctgtctcagcgccggaccttactgcataat
tctttcactgaggttgagggccagttcctctttgccacttccatggatactagtaatact
gatgagatagcagaattcctggaacgctctatcaaagactcatgtgaagggttaatggtg
aaaacactggaagtggatgctacatatgaaattgcaaagagatcacacaattggctgaag
cttaaaaaagattatctggaaggtgttggtgacacccttgatctggtggtgattggtgcc
tacctgggcaagggcaagcgggcaggcacgtatggaggtttccttctagcatgttatgat
gaggaaagtgaagagttccagagtatctgcaagattggcactggattcacagatgaggat
ttggagaaacttcatctctcactcaaggactgtgtgactccacagccacgaccatattat
cgttggggtggaacagctgaacctgatcactggttggaagcccagtatgtctgggaagtg
aagtgtgctgatttatccatttctcccatccacagagcagcatcaggtttggtggatgaa
gaaaagggcatctccttacgctttcccagattcctgcgcatccgagatgacaagaaacca
gaggaggccactagcagtgctcaggtggctgaactttatcggaagcagcagcagatccaa
aatcaagtatcactggaaaaagatgacgacttctactaa

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