Acidipropionibacterium acidipropionici ATCC 4875: PACID_05020
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Entry
PACID_05020 CDS
T02345
Name
(GenBank) 2_5_ligase multi-domain protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbo03016
]
PACID_05020
Enzymes [BR:
pbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PACID_05020
Transfer RNA biogenesis [BR:
pbo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PACID_05020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AFV88343
UniProt:
K7RTX3
LinkDB
All DBs
Position
563148..563777
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AA seq
209 aa
AA seq
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MGHRMYAALVPPAEVLEAVDATLERMAERTSPGDPRRLRWSRPGDAHITLVFMADVDDPD
TLIDALAASLADQPPVAVGLAGAGAFPQPGRARILWLGVNDPADTLPALARRARSAARGA
GGRPESGRFSPHVTAARAHDADVTGEIEALSSFSTPMWVARSVTVFESHLPNPSHGGRKG
GGGGVRHEPVAQIGLEGIPRRSQFRSPNQ
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggacatcggatgtacgcggcactggtgccaccggccgaggtgctcgaggccgttgac
gcgacgctggagaggatggccgagcgcacctcgcccggcgatccgagaaggctgcgctgg
agccgtccgggcgacgcccacatcaccctcgtcttcatggccgacgtcgatgatcccgac
acgctcatcgacgctctcgccgcgtcgctggccgaccagccgccggtggccgtcggcctg
gccggggccggcgccttcccacagcccggccgggcgaggatcctgtggctgggcgtcaac
gaccccgccgacacgctgcccgctctggccaggcgcgcccgctcggccgcccggggagcg
ggcgggcggcccgagagcggcaggttcagcccccatgtcaccgcggcaagagcacatgac
gccgacgtcaccggcgagatcgaggccctgtcgtcattcagcaccccgatgtgggtggcc
cgctcggtgaccgtcttcgagtcgcacctgccgaatccgtcgcacggcggcaggaagggc
ggaggcggcggagtgcgccacgagccggtcgcccagatcggcctggaggggattccccgg
aggtctcagttccggtcgccgaaccagtag
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