Sedimentisphaera salicampi: STSP1_01446
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Entry
STSP1_01446 CDS
T05439
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pbp
Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_01446 (addB)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STSP1_01446 (addB)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STSP1_01446 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
UvrD_C
ATPase_2
ResIII
SLFN-g3_helicase
AAA_19
cobW
Motif
Other DBs
NCBI-ProteinID:
ARN57051
UniProt:
A0A1W6LMS0
LinkDB
All DBs
Position
complement(1946742..1949918)
Genome browser
AA seq
1058 aa
AA seq
DB search
MNVRFVTGRSGAGKTRLCIEEIVRLLEDKNDSRKLIFLVPEQASYQIEEAVLKRCTAGAY
NRLSVVSFSRLSYWILRENRSLETISKSAKRMILLRILQQNAGRLSIFSDISASRLNAEE
LEKLIDEFYASDLSPLDLKTAAEDLKEKQNLYTYQKFSDIAFIYDEFIKFIQNRYRDPDA
YLTELVSEIPKSSFAENSLLWVDGFSGFSAAERAVLRQLAGKAEKTTITFCADPQNPNNP
VFSPSNNTLARLEKDFKKAGGFDPEYIKLTSGGRWKNGSEMLKRLEEGLAAGREEPIESE
EIKTASPESKRDEVVIAAEKIVSMAASGELGFEDIGIITPNISKYERHLREVFADYGIPL
FIDRNQPLQEDVFAKCILTALTFITSGWKTPELSAYLKNPCSPVNFMAAVSIENQLMTRG
IEGKAALNHLDSYEKLRPLLEFARVFSSCKETSIEEFTQAVEAFISSHSASESEEGFVFT
EAAEKILREMNLAFKGCDIEFAELLNIFRSEVLGYNTGKIPAGREEVTAGDVSRARKPEL
KALFIMGALRGDFPAGRPNEGVLSELDRQSAADEGLDISRPLQEMADSEKYLNYIALTRA
SERLFVSFPSGSDSEGPADILRYLTPKNHKPAKNYTSLSELRLPSSVLQERLSALIASER
LTLADAASQLESQEVFQRAASYDNSVELTCKTVRDFYKGRNDISVTALQDYAKCPFMFFC
GRLLSLEPKRFAAFDPLTQGNFIHKVMDAVSKRLLEQGQGFELPVSDLMNLADDCIKNLM
EGSREFQASDKHAEFVLETLIEKAKNLILICHKIADLSRFKLANSEVNFSSETNSLKLYE
DSELCIYMEGFIDRYDLYEHTCGYKLALALDYKLSYHKRNIQQIIHGLDIQLPLYCKALE
KMGFKPAGFLYIGAKPNSDSNIKIEKIADRQVKIIKTSGLINEDYWTFFESLAEKEKSCV
FNLHVKKDGTLAKSTDVLSSGHFKKLLNMCLQTARDAAAKIVDGQIEVIPATTTNKLPCE
YCDFWPVCRYEELFNSSKALEGKSTVDQLKTVLDERIS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaagatttgttacaggaagaagcggggcaggcaaaacgagactttgcattgaa
gaaattgtgaggcttcttgaggataaaaacgattcaagaaagctgatcttccttgtgccc
gagcaggcgagctatcagattgaggaggccgtgctcaagcgatgcaccgccggggcgtac
aacaggctcagcgtggtttcattctcaaggctctcttactggatcctccgcgagaacaga
tcgctggaaacaatcagcaaatccgcaaaacgtatgatactccttcggattttgcagcag
aatgccggcaggctcagcatattctccgacatttccgcttcaaggctcaatgcagaagag
cttgaaaagcttatagatgaattctacgcaagcgatttatcccccctggatttgaaaaca
gcagccgaggatctcaaggaaaagcaaaacctctacacctaccagaagttttctgatata
gcttttatctacgatgaattcatcaaattcatccaaaaccgctacagagacccagacgca
tacttaacagagctcgtaagcgagattccgaaaagcagctttgcagaaaactcacttctc
tgggtagatgggttctccggtttcagcgcagcggaaagggctgtgctgaggcagctcgca
ggaaaggcggagaaaacaacaataaccttctgcgcagacccgcaaaacccgaacaatcct
gtattttcaccctccaacaacacccttgcccgcctcgaaaaagatttcaaaaaggcaggc
gggtttgaccccgaatacataaaactaaccagcgggggcagatggaaaaacggctcagaa
atgcttaaaaggctcgaagagggcctcgctgcaggcagggaagagccgatagaaagcgag
gagattaaaacagcaagccccgaatcaaaaagagatgaggttgtgatagcggctgaaaaa
atcgtttctatggccgcttccggcgagttgggctttgaggatatcgggattatcacacca
aacatctcgaaatacgagagacaccttcgcgaggtgtttgctgattacggcatcccgctt
tttatagacagaaaccagccgcttcaggaggatgtctttgcaaaatgcatcctaactgcc
cttacctttatcacctccggctggaagactcctgaactgtcggcgtatttgaaaaatccc
tgctcgcccgttaatttcatggccgctgtttccatagaaaatcagcttatgacaagaggc
attgaaggcaaagccgcacttaaccatcttgatagttacgaaaaactcagacccctcttg
gaatttgcccgagtcttcagcagctgtaaagaaacttcaattgaagaatttacgcaggca
gtggaggccttcatttcttctcattcagcaagcgagagcgaagagggctttgtattcaca
gaggccgccgagaaaatactgcgggaaatgaacctcgccttcaagggctgcgatatagag
tttgcagagcttttgaatatattccgaagcgaggttttgggctataatacgggcaaaatc
cccgcaggcagggaagaagttacagcgggagacgtaagccgcgcgagaaagcccgagctg
aaggcgctgttcataatgggtgcgctgcggggcgatttcccagcgggcaggcctaacgaa
ggcgtgctcagcgaactcgaccgccaaagcgccgctgatgaggggctggatatctcccgc
ccgcttcaggaaatggcagactccgagaaatacctcaactacatagccctcacaagggca
agcgaaaggcttttcgttagcttcccgtcaggcagcgattcagaagggccagcagatatt
ctcagatacctaacgccaaaaaatcataagcctgcaaaaaattatacctccctttcagag
ctccgtttgccaagcagtgtgcttcaggaaaggctctcagcccttatcgcctcggaaagg
ctaacacttgcagatgctgcaagccagctcgaatcgcaggaggttttccaaagagcagcc
tcatacgacaacagcgttgagctcacttgcaaaaccgtgcgtgatttctataagggcagg
aacgatatctctgtaaccgctttgcaggattatgcaaagtgtccgtttatgtttttctgc
ggcaggctcctcagcttagagccgaaaagattcgccgccttcgacccgctcactcagggc
aattttatacataaggtgatggatgctgtttccaaaaggctgcttgagcagggacagggc
ttcgagctgcctgtttcggatctgatgaaccttgcagacgactgcattaaaaacctcatg
gaagggagcagagaattccaagcatcagacaaacatgctgaattcgtgctcgagactcta
atagaaaaagcgaaaaatttgatcctgatctgtcataagattgctgatttgagcagattc
aaacttgcaaactctgaagtaaatttctccagcgagacaaactccctcaagctatacgag
gattcagagctctgtatttatatggagggctttatagaccgctatgacctatacgaacac
acctgcggctataaacttgccctcgccttagactacaagctttcttaccataaacgaaac
atacaacaaataatacacgggcttgatattcagctcccgctgtactgcaaggcgctcgag
aagatgggctttaagccggcaggcttcttgtatatcggcgcaaaacccaactcagacagc
aatataaagatcgaaaaaatcgcagacaggcaggtgaagataatcaaaacctccggcctt
ataaacgaagattactggacgttctttgaaagcctcgccgagaaagaaaaaagctgcgta
ttcaacctgcatgttaaaaaagacggaactcttgccaaaagcacagacgttctcagctct
gggcatttcaagaaactgctgaatatgtgccttcaaacagccagggatgcagccgctaaa
atagttgatgggcaaatagaggttatccccgcaaccactaccaacaaacttccctgcgaa
tactgcgatttctggcctgtatgcagatacgaagagctgtttaactcctccaaagccctg
gaggggaaaagcactgttgatcagctgaaaactgttcttgatgagaggataagctaa
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