Parvularcula bermudensis: PB2503_06342
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Entry
PB2503_06342 CDS
T01298
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbr03016
]
PB2503_06342
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PB2503_06342
Transfer RNA biogenesis [BR:
pbr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PB2503_06342
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADM09334
UniProt:
E0THN8
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All DBs
Position
1232384..1232998
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AA seq
204 aa
AA seq
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MAIHLHRNDLPADIRFDGAVAVDSETLGLNPLRDRLCVVQLSAGDGDAHLVTFDAGAYDA
PHLKAVLSDPQLLKIFHFARFDVAVFKHWLGVDTTPIYCTKIASKLARTYTDRHGLKDVV
REMTGVELSKQQQSSDWAAAELTEAQRAYAASDVLHLHAVREGLDRMIDREGRRALLTAA
FAFLPTRAALDLAGWSETDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccatccatctccatcgcaatgacctgccggcggatattcgcttcgatggcgccgtg
gcggtcgatagcgagaccttggggttaaatccgttacgggatcgattgtgcgtggtgcaa
ttgtccgctggggacggcgatgcgcatctcgtcacctttgacgcgggcgcctatgatgcc
ccccatctcaaggccgttctgtccgatcctcagctgttgaagatttttcacttcgcgcgc
ttcgacgttgccgtcttcaagcactggcttggggtggatacgaccccgatctattgcacc
aagatcgcctcgaagctggcgcggacctatactgatcgccatgggctgaaggatgtcgtt
cgagagatgacaggcgttgaactgtcgaaacagcagcaatcatccgactgggccgccgcc
gaattgaccgaggcccagcgggcttacgccgcaagcgatgtgctgcaccttcacgccgtt
cgggaagggctcgatcggatgatcgaccgcgaagggcgtcgcgcgcttcttaccgcggct
tttgcgttcctgccgacccgggccgcgcttgatctcgccggatggtcggagaccgatatt
tttgcccatagctaa
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