Parvularcula bermudensis: PB2503_09014
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Entry
PB2503_09014 CDS
T01298
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03030
DNA replication
pbr03430
Mismatch repair
pbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PB2503_09014
03430 Mismatch repair
PB2503_09014
03440 Homologous recombination
PB2503_09014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbr03032
]
PB2503_09014
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_09014
Enzymes [BR:
pbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PB2503_09014
DNA replication proteins [BR:
pbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PB2503_09014
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PB2503_09014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADM09856
UniProt:
E0TCR7
LinkDB
All DBs
Position
1796278..1799736
Genome browser
AA seq
1152 aa
AA seq
DB search
MAKTFVHLHLHSSYSLAEGAIPVSKALQLAKGHQMPALAVTDTNNLFGALEVAEILSAEG
VQPIPGIELKVATESAEPVRDEAGNLASIVLLAQNAVGFERLMALSSEAFLTPLEGETTG
VPLSAVLQRTEGLICLSGGALGPIDRLLAEGRCSEALALLDRMAAAFPQRFYVELQRHPH
HDRTDQQGRYPEERALVEAAYARSLPIVATNNVYFPSPADHAAHDALLCIAGGRYLSEVD
RRLVSEDHYFKSAEEMSGLFKDLPEAIETTVEVAQRCAFRPRTHQPILPSFAGDLAGEVA
ELRRQAEEGLAARLADIPAAAPHQDYYDRLERELGIIEKMGFPGYFLIVADFIQWAKSAG
IPVGPGRGSGAGSLVAYALTITDLDPLRFHLLFERFLNPERVSMPDFDIDFCQDRRDEVI
AYVRDRYGADRVAQIITFGKLQARAVLRDVGRVLQMPFGQVDRLCKMVPNNPANPVTLKE
AVDGEPRFREERERDPMVGTLIDTALRLEGLYRHASTHAAGVVIGDRPLTELVPLYRDSR
SDMPATQYNMKWVEPAGLVKFDFLGLKTLTVIQRALDFLKADGTDLDISAIPLDDPATYD
MLGRGAAIGVFQLESAGMRATLKGLQADCLEDIIALVSLYRPGPMDNIPTYIERKAGREP
PDYLHPLLEDVLKETYGVIIYQEQVMQIAQILAGYSLGEADLLRRAMGKKKKEEMDKQKI
RFVDGAAEKGVSAAKAEGIFELVAKFAGYGFNKSHAAAYAWVSYQTAYLKANHPAAFLAA
SMSLDQSLTDKLSVFVAEAKRCGVVVEPPCVNESQADFAVSGETLRYALGALKNVGAEGM
QVLTTERARGGPFRDLYDLAERVDLRKVGKRSLEQLARAGAFDALGVDRASAMAAADFLL
RYSAAAAEERGSAQAGLFGGMAEGESLARPALPQCPPWPNVERLEQERTALGFYMSGHPL
DDFDSLLAAKGAVSYADIASVVGEGESRHVCLAGAVNEVTRRRSKSGKPFAWVRLSDRSG
DFEVTVFAELLEGAADLLEPGQLLFMGVTAEDQDGALRLTGESVRALSTMEAEGPGGRRM
EVVVQRPEAIYEIKSCLQNLGGAGGQGDLVLIIPDPALDCAIEVAVEGQMAVSGAAKSAL
KTIDGVAQVIIH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggctaagacatttgttcatctccacctccactcgtcctattcgctggcggagggggct
attcccgtatcgaaggcgcttcagctggccaagggccatcaaatgcccgccctcgcggtg
acggatacgaataatctgttcggcgctcttgaagtggcggagatcttgagtgcggagggg
gtccagccgatccccggcattgagctgaaagtggcgacggaatcggcggagccagtgcgt
gacgaggcgggtaatctcgcctctattgttctcctcgcgcaaaatgcagtcgggttcgaa
cgattgatggccctgtccagcgaggcgtttttgaccccgcttgagggagaaacgaccggt
gtgccgctctcggcagttcttcaaaggacagagggcttgatttgtctgtccggcggggcc
ctcggcccgatcgatcggttgctggcggagggacggtgttctgaggcgctggcgcttctc
gatcggatggcggcagcttttccccaacggttctatgtcgaattacaacgtcatccgcac
catgatcggacggatcagcaagggcggtatccggaggagcgcgcgttggtcgaggcggcc
tatgcgcgatccttacccatagtggcgaccaacaatgtgtatttcccaagtcccgcagat
catgcggcccatgatgctttgctctgtattgcgggggggcgatatctgagcgaggtcgat
cgtcggctggtcagcgaagatcattattttaagagcgccgaagagatgtcggggctgttc
aaggacctgcccgaggcgatcgagaccacggtggaggtcgcccagcggtgcgctttccgg
ccccgcacacaccaaccgatcctgcccagttttgccggcgacttggccggggaggtcgcg
gagcttcgccgtcaggccgaggaaggccttgcagcccgactggccgacatcccagccgca
gcgccgcaccaagactattatgaccgattggagcgggagcttgggatcatcgaaaagatg
ggattccccggctattttctcatcgttgctgattttattcagtgggcgaaatcggcggga
attcccgtggggccgggccgggggtccggcgcagggtcactcgtggcctacgcgttgacg
atcaccgaccttgatcccttgcggtttcatcttctcttcgaacggttcctcaaccccgag
cgggtgtcgatgccggatttcgatatcgatttttgccaggatcgtcgcgatgaagtgatc
gcctatgtccgtgaccgctacggggccgacagggtcgcccagatcatcaccttcggtaag
ttgcaggcccgggcggtcctgcgggatgtggggcgggtgctgcaaatgcctttcgggcaa
gttgatcggctgtgtaagatggtgccgaacaatcccgccaatcccgtgacgctcaaagag
gcggtcgatggcgaaccccggtttcgggaggagcgcgagcgcgacccgatggtgggaacg
ctgatcgatacggccctcagacttgaggggctctatcgacatgcgtcgacccatgcggcg
ggcgtagttatcggtgatcgtccgttgacagagcttgtgcctctctatcgtgattcgcgg
tcggacatgcccgctacgcaatacaacatgaaatgggtggagccggccggactggtcaag
ttcgacttcctcggtctcaaaacgctgacggtcattcaacgcgccttggattttctcaag
gcggatgggaccgatctcgatatttcagcgataccgctcgacgatccggctacttacgat
atgttgggccgtggggcggcgatcggtgtgttccagcttgaatctgcgggtatgcgggcg
acccttaaggggctgcaagcggattgtctcgaagatatcatcgcgctggtctcgctctat
cgtccggggccgatggataatatccctacctatatcgagcggaaggcggggcgggagccg
cccgattatcttcatccccttctcgaggacgtcctgaaagaaacctatggggtcatcatc
taccaagagcaggtgatgcagatcgcccaaattctcgccggctattccctcggcgaggcc
gatcttctgcgtcgcgccatgggcaagaagaaaaaggaggagatggacaagcagaagatc
cgatttgtcgacggggcggccgagaagggcgtgtcggcggcgaaggccgaggggatcttc
gaactggtcgccaaatttgcgggctatgggttcaacaaatcccacgcggccgcttatgca
tgggtgagctatcagacagcctatttgaaagcgaaccaccccgcggcctttttggcggcg
tcgatgtcgcttgatcagtcgctcactgacaaactttcagtcttcgtggctgaggcgaag
cggtgcggcgtcgtggtggagccgccctgtgtgaacgagtctcaagcggactttgccgtc
tcgggcgagacattacggtacgcgcttggggcgctcaaaaatgtcggggccgaagggatg
caggtgctgaccaccgaacgcgcgcgcggcggcccttttcgggatctctatgatctcgct
gaacgggtggatcttcgaaaagtcggaaagcggagccttgagcaattggcgcgggcgggg
gccttcgatgcgctgggggtcgatcgggcatccgcgatggctgcggcggatttcttgttg
cggtactcggcggcggcggccgaggagcgcggtagtgcccaggcgggacttttcggcggc
atggcggagggggagagccttgctcggcccgccctgccccagtgtccgccctggccgaat
gttgagcgtctcgagcaggagaggaccgcccttgggttttatatgagcgggcatccgctt
gatgatttcgactccctcctggcggcgaagggggcggtctcttacgcggatattgcaagc
gtggtgggagagggggagtcgcgccatgtctgtctggcgggggcggtgaacgaagtcacc
cgacgtcgttcgaagagcggaaagcctttcgcatgggtgcggctctctgatcggtccggt
gatttcgaggtgactgttttcgccgagctccttgagggggcggcggatctcctcgagccc
gggcaattattgttcatgggcgtgaccgctgaagatcaggatggagcccttcggttgacc
ggagaaagcgtgcgggcgctgtcgaccatggaagcggaggggcccggggggcggcgcatg
gaagtcgtggtgcagcgaccagaggcgatttacgagattaaatcctgtttgcagaatcta
ggcggggctggggggcagggggatttggtcttgatcattcccgatccggcgctcgattgc
gcgatcgaagttgccgttgagggacaaatggcggtgtctggcgccgcaaagagtgccctt
aagactatagacggcgtcgcccaggtcatcattcactag
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