Parvularcula bermudensis: PB2503_09739
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Entry
PB2503_09739 CDS
T01298
Name
(GenBank) D-alanylalanine synthetase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00470
D-Amino acid metabolism
pbr00550
Peptidoglycan biosynthesis
pbr01100
Metabolic pathways
pbr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PB2503_09739
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PB2503_09739
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PB2503_09739
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_09739
Enzymes [BR:
pbr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PB2503_09739
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Precursor biosynthesis
Amino acid ligase
PB2503_09739
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ADM10000
UniProt:
E0TDT4
LinkDB
All DBs
Position
1947073..1948008
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AA seq
311 aa
AA seq
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MKEFRRIVVLKGGWCSEREISLISGATAADALRDEGYSVEEIDVGRDLATVLPASFDRLG
PDAVFNALHGPFGEDGRVQGLLEILNIPYTHSGVLSSALCMNKPRAKMVLAQAGLKVPEG
RTLPLNSLTGRHPMAAPYVLKPIGDGSSFGVNIVMSEQEVAPKTEDLDADLFGTEALVET
FIPGRELTVSVLGAVALGVTEIVPKNTFYDFESKYAEGGSTHVLPADIPEEVADAVKAQS
LKAVQALGCRGLSRVDFRWDDRSGVNGLFILEVNTQPGMTPTSLSPEQAAAAGIDFGALV
RWMIEDASCLR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattccggcgcatcgttgtccttaaagggggctggtgttcggaacgagagatc
agcctgatctccggggcgacggcggctgacgcgttgcgtgacgaggggtactctgtcgag
gagatcgatgtcggtcgcgatctggcgacggtcttgcctgcaagctttgatcggctgggg
ccggatgcggtcttcaatgcgctgcacggcccctttggtgaggatggtcgggtccagggg
ctcttggagatcctcaatattccttacacccattcgggggttctcagctcagctctctgt
atgaacaagccgcgggcgaagatggttctcgcccaggcgggccttaaagtgccggagggg
cgcacgctgcctctcaattcgcttaccggccgccatccgatggcggcgccttacgtgctg
aaaccgatcggcgatggctcctcctttggggtgaatatcgtcatgagcgagcaagaggtc
gccccaaagacggaggatctggatgcggatctctttgggacggaggcgttggtcgagaca
ttcattcccggtcgggagttgacggtctccgtccttggggccgtcgcccttggggtgacc
gagatcgttcccaagaataccttttacgattttgagtcgaaatatgccgaaggcggatcg
acccatgtcctcccggcggatattcccgaggaggtggcggacgccgtcaaggctcagtcc
ttaaaagcggtccaggcgcttggctgtcgggggctcagcagagtcgactttcgttgggat
gaccggtcaggcgttaatggtctgtttatcctggaggtgaatacccaaccagggatgacc
cccacgtcgctctctcccgaacaggcagcggcggccggcatcgatttcggtgccctggtg
cggtggatgatcgaggatgcctcatgcctccggtga
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