Pectobacterium brasiliense: B5S52_20445
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Entry
B5S52_20445 CDS
T06364
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00250
Alanine, aspartate and glutamate metabolism
pbra00310
Lysine degradation
pbra00350
Tyrosine metabolism
pbra00650
Butanoate metabolism
pbra00760
Nicotinate and nicotinamide metabolism
pbra01100
Metabolic pathways
pbra01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
B5S52_20445 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B5S52_20445 (gabD)
00310 Lysine degradation
B5S52_20445 (gabD)
00350 Tyrosine metabolism
B5S52_20445 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
B5S52_20445 (gabD)
Enzymes [BR:
pbra01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
B5S52_20445 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
B5S52_20445 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
B5S52_20445 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ARA78116
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Position
complement(4559608..4561062)
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AA seq
484 aa
AA seq
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MSGQNLQDHELFKTGYFAAGKWQQSGATFEVVNPATGESIASVAKAGKKETQAAIDAAYA
AFPAWKRKTAKERSEILYRWYELILENKRYLAELMTAEQGKPVQEAEGEVVYAANFIQWF
AEQGKRANGEIIPPAKPGSKIYATREPVGVVVAITPWNFPLAMLTRKLGPALAAGCTGVI
KPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTEVGK
TLVRNAADTMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQD
GVYDEFVSLLAEEVKKLKVGNGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKALVGGK
RHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKTEEEVIQRANNTPFGLAAYFY
SQNLQRVFRVADALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH
LGGL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacaaaatttgcaggatcatgaactgttcaaaacgggctactttgctgcgggg
aaatggcagcagagcggcgctaccttcgaggtcgtcaatccggcgacgggcgagtcgatt
gccagcgtggcgaaagcgggaaagaaagagacgcaggcggcgattgacgctgcctatgcc
gcgtttcctgcctggaagcgcaaaaccgcgaaagaacgttctgaaattctgtatcgctgg
tacgaactgattctggaaaataaacgctatctggcggagctgatgaccgccgaacagggc
aagcctgtgcaggaagccgaaggtgaagtcgtctacgcggcgaatttcattcagtggttt
gctgagcagggcaagcgagctaacggtgagattattccgccagctaaacccggatcgaag
atttacgccacgcgtgaacccgttggcgtcgttgttgccattacgccgtggaatttcccg
ctggcgatgctgacgcgtaagctgggaccggcgctggccgcaggatgtactggcgtgatc
aaacccgccaacaacacgccgctgtctgcgtttgcgctgttggcgctggcgcagcaggcg
ggtgtgccggatggcgtactcaacggcgtggcgggcgacacgcaggcgatcagcgatacc
gtcatggcgagcgataaagtgcgcaaaatttccttcactggttcgactgaagtagggaaa
acgctggtgcgcaacgccgcagatacgatgaagaaagtgtcgatggaactgggcggcaac
gcgccttatatcgtgtttgatgacgcagatattcaggccgcagtaaaaggcgcgatagct
aaccgtttccgtaacgcaggtcaggtctgtgttagcgccaaccggttttatattcaggac
ggcgtctacgatgagtttgtctctttgcttgcggaagaagtgaagaagctgaaagtcggt
aacggtatggatgacggcgtcgtgctcggtccgctgattgacgatgctgcggtcgagaag
gtggaaaagcacgtcaatgacgcggtggaaaagggaggcaaggcgcttgtcggtggtaaa
cggcacaagctgggccacagcttctttgagccgacggtgattgttgatgccaacgaagcg
atgctgctggcacaggaagaaacatttggtccggtcgcgccctgcttccgcttcaaaacg
gaagaagaggtgattcagcgcgccaacaatacgccgtttgggctggccgcctacttctac
agccagaatttgcagcgtgtgttccgcgtggcagacgcgctggagagcggcatgattggt
attaacgaatgcgcggtttcaactgaattagcccccttcggcggtgtgaaagagtcagga
ttaggccgcgaaggctcggttctggggctggacgaatttctggaagtgaaaacctggcat
ttgggcgggttgtga
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