Rubinisphaera brasiliensis: Plabr_4792
Help
Entry
Plabr_4792 CDS
T01431
Name
(GenBank) NUDIX hydrolase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00900
Terpenoid backbone biosynthesis
pbs01100
Metabolic pathways
pbs01110
Biosynthesis of secondary metabolites
Module
pbs_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
pbs_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Plabr_4792
Enzymes [BR:
pbs01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
Plabr_4792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF3667
Motif
Other DBs
NCBI-ProteinID:
ADY62363
UniProt:
F0SRB2
LinkDB
All DBs
Position
complement(5973772..5974299)
Genome browser
AA seq
175 aa
AA seq
DB search
MSSAEPEEWFDVVDEQDNVLRSAPRSEVHGQGLLHRASHIWVFNSSNELLIHLRAAGKEE
EPLKWTSSAAGHLAAGESYASAAERELQEELGLQAELTYLTKLPSGPEIGYEHTALFSCV
CDDPPSPDPREIAEWKFAPLDTVREMLEAEPQRFTNPFRLLFFWYLQQNLNTEKR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcagccgagccggaagaatggttcgatgtcgttgatgaacaggacaatgtcctc
cgcagcgccccccgttcggaagtgcacggacaggggctgctgcatcgggcgtcgcatatc
tgggtcttcaactcatcgaacgaactgctgattcacctgcgggcggctggcaaggaagag
gaaccgctcaagtggacctcttcggcggctgggcatcttgcggccggcgagtcgtacgcg
tccgcggctgagcgggaactgcaggaagaactcggtcttcaagcggagctgacgtattta
acgaagctcccctccggcccggaaatcggctacgagcatacggcgctgttttcctgcgta
tgcgacgatcctccgtcgcctgatccgcgggaaattgcggagtggaagttcgcgcctctt
gacacggtgcgcgaaatgcttgaggctgagccgcagcggttcacgaacccatttcggctg
ctgttcttctggtatttgcagcagaatctcaataccgaaaaaagatag
DBGET
integrated database retrieval system