Pseudoalteromonas sp. Bsw20308: D172_003170
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Entry
D172_003170 CDS
T04175
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbw03019
]
D172_003170
03009 Ribosome biogenesis [BR:
pbw03009
]
D172_003170
Messenger RNA biogenesis [BR:
pbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D172_003170
Ribosome biogenesis [BR:
pbw03009
]
Eukaryotic type
Pre-60S particles
RNases
D172_003170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALQ07148
LinkDB
All DBs
Position
738090..738635
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AA seq
181 aa
AA seq
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MTINKSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQNDELLNGMDE
WCTTQHGKSGLTARCKASTFDEEHAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLAKVNKKGSHLALDDIKDSIMELKIYRENFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactattaataaatcaaatttaatttggctcgatcttgaaatgaccggactcgaacca
gagaccgataaaatactcgaaattgcgacggttgtcactgacgcagacctgaatatatta
gccgaagggccaactatagctattcatcaaaatgatgaattactaaatggtatggacgag
tggtgtacgactcagcatggtaaatcggggttaacagcgcgctgcaaagcaagtaccttc
gatgaagagcatgctgtagcgcaaacgttagattttttaaaacagtgggtgcctgcgggt
gtatcaccaatgtgtggtaattcaattgggcaagatcgtcgctttatgaataaatacatg
cgtgagcttgaagactttttccattaccgaaatctcgacgtaagtactattaaagaatta
gcacgtcgctggaaacctgaagtgcttgctaaagtgaacaaaaaaggctcacaccttgct
ttggacgatattaaagattcgattatggaattaaaaatctatagagaaaatttctttaat
ttgtaa
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