KEGG   Pseudoalteromonas sp. Bsw20308: D172_003170
Entry
D172_003170       CDS       T04175                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbw03019]
    D172_003170
   03009 Ribosome biogenesis [BR:pbw03009]
    D172_003170
Messenger RNA biogenesis [BR:pbw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D172_003170
Ribosome biogenesis [BR:pbw03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    D172_003170
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ALQ07148
LinkDB
Position
738090..738635
AA seq 181 aa
MTINKSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQNDELLNGMDE
WCTTQHGKSGLTARCKASTFDEEHAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLAKVNKKGSHLALDDIKDSIMELKIYRENFFN
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgactattaataaatcaaatttaatttggctcgatcttgaaatgaccggactcgaacca
gagaccgataaaatactcgaaattgcgacggttgtcactgacgcagacctgaatatatta
gccgaagggccaactatagctattcatcaaaatgatgaattactaaatggtatggacgag
tggtgtacgactcagcatggtaaatcggggttaacagcgcgctgcaaagcaagtaccttc
gatgaagagcatgctgtagcgcaaacgttagattttttaaaacagtgggtgcctgcgggt
gtatcaccaatgtgtggtaattcaattgggcaagatcgtcgctttatgaataaatacatg
cgtgagcttgaagactttttccattaccgaaatctcgacgtaagtactattaaagaatta
gcacgtcgctggaaacctgaagtgcttgctaaagtgaacaaaaaaggctcacaccttgct
ttggacgatattaaagattcgattatggaattaaaaatctatagagaaaatttctttaat
ttgtaa

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