Pseudoalteromonas sp. Bsw20308: D172_004000
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Entry
D172_004000 CDS
T04175
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D172_004000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbw01007
]
D172_004000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbw03016
]
D172_004000
Enzymes [BR:
pbw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
D172_004000
Amino acid related enzymes [BR:
pbw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
D172_004000
Transfer RNA biogenesis [BR:
pbw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D172_004000
Prokaryotic type
D172_004000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Asparaginase
Motif
Other DBs
NCBI-ProteinID:
ALQ07296
LinkDB
All DBs
Position
complement(927685..930540)
Genome browser
AA seq
951 aa
AA seq
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MDKTYNPQDIEQSLYQDWEQKGYFKPSGKGVPYSIMIPPPNVTGSLHMGHAFQDTIMDTL
TRFKRMQGNNTLWQVGTDHAGIATQMLVERKLHAEEGKTRHDLGREDFINKIWEWKKESG
GTITKQLRRLGASVDWDRERFTMDDGLSEAVKEVFVRLHKENLIYRGKRLVNWDPKLHTA
ISDLEVENKDKQGHMWNLRYPLADGVTTQDGKDYIVVATTRPETMLGDSGVAVNPDDERY
TDLIGKEILLPIVNRRIKIVADEHADKDKGTGCVKITPAHDFNDNEVGKRHQMPMINIFD
KDAAILTQGETYTFDGKELEFDAPIPERLHGLDRFAARKAIVAEFEELGLLEKIEDHGLT
VPYGDRSGVVIEPLLTDQWYVRVAPLAEPAKDAVKNGDIQFVPKQYENMYFSWMNDVQDW
CISRQLWWGHRIPAWYDSEGNVFVGRDEAEVRRENNIADSVTLSQDEDVLDTWFSSALWT
FSTQGWPENTDDLKTFHPSDVLVTGFDIIFFWVARMIMMTLHFVKDENGKPQVPFKTVYV
TGLIRDDNGDKMSKSKGNVLDPLDMIDGIELENLVQKRTGNMMQPKLAAKIEKDTRKVFA
GGIEAHGTDALRFTLAAMASTGRDINWDMNRLEGYRNFCNKLWNASRYVLMNTEEQDCGF
ANGAQTELSLADRWILGQYEATVKTYTEHLDNYRFDLAANTLYEFTWNQFCDWYLELTKP
VLFKGNEAQQRGTRNTLITVLESLLRLMHPMMPYITETIWQRVAPLAGLKTENTSIMLQP
FPVYNEASVDAKAMDDLEWVKQFILAIRNIRGEMDISPSKPLSVLLANASSDDVRRIEEN
KSFLASLAKIEEFTMLENKNDAPACATSYVGNLEIMIPMAGLIDVEAELSRINKQLEKAE
KGLAQVQNKLANEKFVNNAPEAVLAKENAKLAEFSDAKTKLLEQKTKIESL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacctacaatccgcaagatattgaacagtctctatatcaagactgggaacaa
aaaggctactttaagccgtctggcaaaggcgtaccatattcaattatgatcccgccgcca
aatgtcacaggtagcttacacatgggccacgccttccaagatacaataatggatacctta
acgcgttttaaacgtatgcaaggtaacaacacattatggcaagtaggtactgaccacgca
ggtattgcaacgcaaatgttggttgagcgtaaattgcatgcagaagaaggcaaaacacgc
cacgatttaggccgtgaagattttattaataaaatctgggaatggaaaaaagaatcgggc
ggcactattactaagcagcttcgtcgccttggcgcatcggttgattgggatcgtgaacgc
tttacaatggacgatggtttatctgaagccgttaaagaagtgtttgtacgccttcataaa
gaaaacctaatttaccgtggcaaacgcctagtaaactgggatcctaaattacacactgct
atttctgatcttgaagttgaaaacaaagacaagcaaggccacatgtggaacttacgttac
ccactggctgatggcgtaacaacacaagacggaaaagactacatagtagttgctacaact
cgccctgaaaccatgcttggcgactcgggtgttgcagtaaatccagatgacgaacgctat
acagatttaatcggtaaagagattttattaccaatagttaatcgtcgtattaaaattgtt
gctgacgaacatgccgataaagataaaggcacgggctgtgtaaaaataaccccagcgcac
gactttaacgataacgaagtgggcaagcgtcatcaaatgccgatgatcaacattttcgat
aaagacgccgctattcttacccaaggtgaaacatacacctttgacggtaaagagcttgag
tttgatgcgccaattcctgagcgcctgcacggccttgatcgttttgctgcgcgtaaagcg
attgtggcagaatttgaagagctaggcctacttgaaaaaattgaagaccatggtttaacg
gttccttacggcgatcgctctggtgtggtaattgagccactacttaccgaccaatggtat
gtacgtgttgccccccttgctgaacctgcaaaagacgcagttaaaaacggcgacattcaa
tttgtacctaagcaatacgaaaacatgtacttctcgtggatgaacgacgtacaagattgg
tgtatttcacgccagctttggtggggtcaccgtattccagcttggtacgacagtgaaggc
aatgtatttgttggtcgcgacgaagcagaagtacgccgtgaaaacaacattgcagacagc
gtaacgctaagccaagacgaagacgtacttgatacgtggttctcatcagcgctttggacg
ttctctacacaaggttggccagaaaataccgatgatttaaaaaccttccacccgtctgac
gtgttggtaactggttttgatattattttcttctgggttgcgcgcatgattatgatgacg
ctgcactttgtaaaagacgaaaatggcaaaccacaagttccgtttaaaaccgtgtatgta
actggcttaatacgtgacgacaatggcgataaaatgtctaagtcaaaaggtaacgtactt
gacccattagacatgattgacggcattgaacttgaaaacctagtacaaaaacgtactggt
aacatgatgcagccaaaacttgccgctaaaatcgaaaaagatacgcgtaaagtatttgca
ggcggtattgaagcacacggcaccgacgcccttcgctttacacttgctgcaatggcatct
actggtcgtgatattaactgggatatgaaccgccttgaaggttaccgtaacttctgtaac
aaattatggaacgcgagccgttacgtattaatgaacacagaagagcaagactgtggtttt
gcaaacggtgctcaaacggagctttcattagctgatcgttggattttaggtcagtatgaa
gctactgttaaaacctatacagagcatttagataactaccgctttgacttagctgctaac
acgctttacgaattcacttggaaccaattttgtgattggtacttagagctcactaagccg
gtattatttaaaggtaatgaagcgcagcaacgtggtacacgtaatacacttattaccgta
cttgaaagcttactgcgtttaatgcacccaatgatgccatacatcactgaaactatttgg
cagcgtgttgcacctcttgcaggccttaaaacagagaacaccagcattatgcttcagccg
ttccctgtatataatgaagcaagcgttgatgctaaagcaatggacgatttagaatgggtt
aaacaattcattttagcgattcgtaatattcgtggtgaaatggatattagtccaagtaaa
ccacttagcgtattacttgctaatgcatcaagcgacgacgtgcgccgcattgaagaaaac
aaatcatttttagcatcacttgcaaaaattgaagagtttacaatgcttgaaaacaaaaac
gacgcaccagcatgtgcaacgtcttatgttggcaaccttgagatcatgatcccaatggcg
ggcttaattgatgtagaagccgagctttcgcgtattaataagcaactcgaaaaagccgaa
aagggcctagcacaagtgcaaaacaaactcgctaacgaaaagtttgttaataacgcacct
gaagcggtacttgctaaagaaaatgcaaaattggctgagtttagcgatgctaaaactaag
ctacttgagcaaaaaactaaaatagaaagcttataa
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