KEGG   Pseudoalteromonas sp. Bsw20308: D172_017530
Entry
D172_017530       CDS       T04175                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbw02044]
    D172_017530
Secretion system [BR:pbw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D172_017530
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: ALQ09899
LinkDB
Position
pPBSW1:62715..64043
AA seq 442 aa
MGDNTRVAWTEGMFLRPQHFQQSDKHIANVIQQVCSGNLADPWGILEVAIDTELLKSGQF
AIESLSAITPDLLPIDMPQSTSLPEPLVVGKDIYDEIVYLAIPALKNSGINLSAPEENIV
TRYKLNDLSVSDDLVGAQSQEVIQVAKIYSKLALSSDDHSGYILLPLARILDVSSEGQIK
LDNKYIPASLKVGQCKPLLGLVREIGSMIKQRSESIAVRLCQGYAGSTSVADFIMLQTLN
KYDAVFDNLLSVNNIHPNILYIRLIELAGELSTFSTVNKRVPKLPKYDHKNLGQVFSEVV
NFLYQSLSHVIEQTATEIKLEQSKFGISFGALNDKSVLNSAQFILAIKASVPHEELRKIL
PSQIKIGSVETIRDLVNNQIPGITISSLPTAPRQIPYHAGFHYFELNKQGEHWDKLRSSG
GIAIHLSGSYPELQLSLWAIRT
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgggtgataacactcgtgttgcttggactgaagggatgtttttaaggccgcaacacttc
cagcaatcagataaacatattgcaaatgtaatccaacaagtgtgcagtggtaaccttgca
gatccttggggaatacttgaggtagcaattgatactgaactgctaaaatcgggtcaattt
gcgattgaatcactgtcggcaattaccccagatttactaccgatagatatgcctcagtca
acttctttgcctgagccattagtggtcggcaaagatatatatgacgagatagtttatctt
gcaataccggcattgaaaaatagcggcataaacttatctgccccagaagaaaatattgta
actcgttataaattgaatgatttatcagtgagtgacgatttagtgggggcgcaatctcaa
gaagttattcaagtcgctaaaatatatagtaagttagcactttcctctgatgatcactct
ggttatatattgctgcctttagcaagaattctagatgttagtagtgaagggcaaataaag
ctagataataagtatataccggcatctttaaaagtagggcaatgcaagcctcttttgggt
cttgttcgcgaaattggttcaatgatcaaacagcgctcagaaagcatcgccgttagattg
tgtcaaggatatgcaggaagtacatcagttgccgactttattatgctgcaaacattaaat
aagtatgatgcagtatttgacaacttattatcagtcaataatatccatccaaatatcttg
tatattaggttgattgagcttgccggagagctgtcgacgtttagtactgttaataaacga
gttcctaagctccctaaatacgatcataaaaacttgggtcaagtgtttagcgaagtcgtt
aacttcttatatcagtcgttgagtcatgttattgagcaaacagcaactgaaatcaagtta
gaacaaagcaaatttggaatttcatttggtgcattaaacgataagtcggtgctaaattca
gctcaatttattctagcaataaaagcaagtgtcccgcatgaagagttacgtaaaatactg
ccatcacagataaaaataggcagcgtagaaactatacgtgatcttgttaataaccaaata
ccaggaataacaatcagtagtttacctacagccccaagacaaatcccatatcatgcaggt
ttccattattttgaattaaataagcagggagagcattgggataagttgcgctctagtggc
ggaattgccattcatttatcaggtagctacccagaactacaattaagcctttgggcaatt
agaacttaa

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