Syntrophotalea carbinolica: Pcar_0050
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Entry
Pcar_0050 CDS
T00285
Symbol
nifS-1
Name
(GenBank) nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00730
Thiamine metabolism
pca01100
Metabolic pathways
pca01240
Biosynthesis of cofactors
pca04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pcar_0050 (nifS-1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Pcar_0050 (nifS-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pca03016
]
Pcar_0050 (nifS-1)
03029 Mitochondrial biogenesis [BR:
pca03029
]
Pcar_0050 (nifS-1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pca02048
]
Pcar_0050 (nifS-1)
Enzymes [BR:
pca01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Pcar_0050 (nifS-1)
Transfer RNA biogenesis [BR:
pca03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Pcar_0050 (nifS-1)
Prokaryotic type
Pcar_0050 (nifS-1)
Mitochondrial biogenesis [BR:
pca03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Pcar_0050 (nifS-1)
Prokaryotic defense system [BR:
pca02048
]
DNA phosphothiolation system
Sulfur modification proteins
Pcar_0050 (nifS-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Peptidase_C6
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABA87313
UniProt:
Q3A8H9
LinkDB
All DBs
Position
complement(59568..60791)
Genome browser
AA seq
407 aa
AA seq
DB search
MRTVYLDNNATTRTAPEVVEAMLPFFSDLYGNPSSMHFFGGQVGRHVKQAREQVAALIGA
HPDEIVFTSCGTESDNAAIMGTLYSYPEKKHIVISRVEHPAVLNVAHQLQARGYRITELG
VDREGQLDLDELRTVLTDDTALVSIMSANNETGVLFPIDEIAAIVHERGIPFHTDAVQSI
GKIPMDMAKSPIDMLSLSGHKLHAPKGVGALYIRKGTRFAPFVVGGHQEAGRRGGTENVP
YIIGLGRAAQFAMDHLQEENTRVKALRDRLEAELLKSIPNTMVNGDVKNRLPNTCNLSFE
YIEGESILMLLSDEGICASSGSACTSGSLQPSHVLRALGVPFTAAHGSVRFSLSVYNNQE
DIDHVIATLPPIIQRLRDISPFWKDYVEGKPMSSFLTGGDIEHHVHG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtctatctcgacaacaacgccaccacccgcaccgcgccggaagtggttgag
gcgatgctgccctttttcagcgatctgtacggcaacccctcaagcatgcactttttcggc
ggccaggtcggacgccacgtcaagcaggcgcgggagcaggtggcggccctgatcggcgcc
catccggacgaaatcgtcttcaccagctgcggcaccgaaagcgacaacgccgccatcatg
gggaccctctactcctacccggagaaaaaacatatcgtcatctcgcgggtcgagcacccg
gcggttctcaacgtcgcccaccaattgcaggcccgcggctaccggattaccgaactgggg
gtcgatcgcgagggccagcttgaccttgacgagctgcgtacggtgctgaccgacgacacg
gccctggtcagcatcatgtccgccaacaacgaaaccggcgtgctgttccccatcgacgaa
atcgccgctatcgtgcacgaacgcggcatccccttccacaccgacgccgtgcagtccatc
ggcaagattcccatggatatggccaaaagccccatcgacatgctgtcgctgtccggccac
aagttgcacgcccccaaaggcgtcggcgccctctacatccgcaagggcacgcgttttgcc
cccttcgtggtcggcggccaccaggaagccggccgacgcggcggcacggaaaacgtccct
tacatcatcggtctgggacgtgcggcccagttcgccatggatcatctgcaggaggagaac
acacgcgtcaaggctttgcgtgatcgtttggaagcggaattgctgaaaagtatccccaac
accatggtcaacggcgatgtcaaaaaccgcctgcccaacacctgtaatctgagctttgag
tatattgaaggggaatcgattctgatgctgctcagcgacgaaggcatctgcgcctcgtcc
ggttcggcctgcaccagcggctcgctgcaaccctctcatgtgctgcgtgccctcggggta
ccgtttaccgccgcccacggttctgtacgtttcagcctcagcgtctacaacaaccaggag
gatatcgaccacgtcatcgccaccctgccgcccattatccaaagactgcgcgatatttcg
cctttctggaaggattacgtggagggcaagccgatgagttcttttttgaccggcggcgat
atcgagcatcacgttcacggatag
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