Pseudomonas cannabina pv. alisalensis: JGS08_00405
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Entry
JGS08_00405 CDS
T07379
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00250
Alanine, aspartate and glutamate metabolism
pcab00280
Valine, leucine and isoleucine degradation
pcab00310
Lysine degradation
pcab00410
beta-Alanine metabolism
pcab00640
Propanoate metabolism
pcab00650
Butanoate metabolism
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
Module
pcab_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JGS08_00405 (gabT)
00650 Butanoate metabolism
JGS08_00405 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JGS08_00405 (gabT)
00280 Valine, leucine and isoleucine degradation
JGS08_00405 (gabT)
00310 Lysine degradation
JGS08_00405 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JGS08_00405 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcab01007
]
JGS08_00405 (gabT)
Enzymes [BR:
pcab01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
JGS08_00405 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
JGS08_00405 (gabT)
2.6.1.48 5-aminovalerate transaminase
JGS08_00405 (gabT)
Amino acid related enzymes [BR:
pcab01007
]
Aminotransferase (transaminase)
Class III
JGS08_00405 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QQN22235
LinkDB
All DBs
Position
complement(82623..83927)
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AA seq
434 aa
AA seq
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MNSKVDETPHLLRQRDQFVPRGIVTAHPLVIDRAQGSELWDVDGKRYLDFVGGIGVLNIG
HNHPNVVAAIQAQLAKVTHACFQVASYQPYVDLARRLSLMIAGQSGIDHKAVFFTSGAEA
VENAVKIARAHTNRPAIISFRGGFHGRTLLGTTLTGMSQPYKQNFGPMAPEVFHTPYPNE
YRGVTTEVALAALHELLATQVAPDRVAAILIEPIQGDGGFLTAPVEFLKALRALTEQHGI
VLILDEIQTGFGRTGKWFGFEHAGIQPDLVTVAKSLAGGMPLSGVVGRAEIMDAPLPGGL
GGTYGGNALSCAAALAVIDTYEQDNLLARGEQLGEHLRAGLLKLKARYACIGDVRGTGFM
LAMEMVKDDAARSPDADLNQKVIDQARIGGLLVIKCGVYRNVLRFLAPLVTTEQQIDEAL
TILDAALARVLKSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaagtcgacgaaacccctcatctgctccgccagcgcgaccagttcgtgccg
cgtggcatcgtcacggcccacccgctggttatcgaccgcgcgcaaggctctgaactgtgg
gacgtcgacggcaagcgctatctggatttcgtcggcggcatcggcgtgctgaacatcggc
cacaaccacccgaacgtggtcgcggcgattcaggcgcagcttgctaaagtcacccacgcc
tgcttccaggtcgcgtcttatcagccgtatgtcgatctggccaggcgcctgagcctgatg
atcgcggggcagagcggcatcgatcacaaggcagtgttctttacctccggtgccgaagcg
gtggaaaacgcggtgaaaattgcccgcgctcacaccaatcgcccggcgatcatctcgttt
cgcggcggcttccacggtcgtacgctgcttggcacaacgctgaccggcatgagccagccg
tacaaacagaatttcggcccgatggcgccggaagtgttccacaccccgtacccgaacgaa
tatcgcggcgtgaccactgaagtggctcttgcggcgctgcatgaattgctggcaacccag
gttgcaccggaccgtgtggctgcgatcctgatcgagccgatccagggcgacggcggcttt
ctgactgcgccggtcgaattcctcaaggccttgcgcgccttgaccgagcagcatggcatc
gtgctgattctcgatgaaatccagaccggtttcggtcgtaccggcaaatggttcggtttt
gagcacgccggcatccagcctgacctggtgaccgtcgccaagagccttgcgggcggcatg
ccgctgtcgggtgtggtcgggcgagccgagatcatggatgcaccgcttccgggcggcctg
ggcggcacctatggcggcaatgcgctgtcctgcgctgcggcgctggcggtgatcgacacg
tacgagcaggacaatctgctggcgcgtggcgaacagttgggcgaacacctgcgtgccggg
ctgctcaagctcaaagcgcgttacgcctgcatcggcgacgtgcgcggcaccggtttcatg
ctggccatggaaatggtcaaggacgacgcagcccgcagcccggacgccgatctcaatcag
aaggtcatcgatcaggcgcgtatcggcgggctgctggtgatcaagtgcggcgtataccgc
aacgtactgcgcttcctggcaccgctggtgaccaccgaacagcagatcgacgaggcgctg
accatcctcgatgccgctctggcacgagtattgaagtccagctga
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