Physeter catodon (sperm whale): 102974256
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Entry
102974256 CDS
T06011
Gene name
DDB2
Definition
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03420
Nucleotide excision repair
pcad04115
p53 signaling pathway
pcad04120
Ubiquitin mediated proteolysis
pcad05161
Hepatitis B
pcad05169
Epstein-Barr virus infection
pcad05200
Pathways in cancer
pcad05202
Transcriptional misregulation in cancer
pcad05210
Colorectal cancer
pcad05212
Pancreatic cancer
pcad05213
Endometrial cancer
pcad05214
Glioma
pcad05216
Thyroid cancer
pcad05217
Basal cell carcinoma
pcad05218
Melanoma
pcad05220
Chronic myeloid leukemia
pcad05222
Small cell lung cancer
pcad05223
Non-small cell lung cancer
pcad05224
Breast cancer
pcad05225
Hepatocellular carcinoma
pcad05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102974256 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
102974256 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102974256 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102974256 (DDB2)
05202 Transcriptional misregulation in cancer
102974256 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
102974256 (DDB2)
05212 Pancreatic cancer
102974256 (DDB2)
05225 Hepatocellular carcinoma
102974256 (DDB2)
05226 Gastric cancer
102974256 (DDB2)
05214 Glioma
102974256 (DDB2)
05216 Thyroid cancer
102974256 (DDB2)
05220 Chronic myeloid leukemia
102974256 (DDB2)
05217 Basal cell carcinoma
102974256 (DDB2)
05218 Melanoma
102974256 (DDB2)
05213 Endometrial cancer
102974256 (DDB2)
05224 Breast cancer
102974256 (DDB2)
05222 Small cell lung cancer
102974256 (DDB2)
05223 Non-small cell lung cancer
102974256 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
102974256 (DDB2)
05169 Epstein-Barr virus infection
102974256 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102974256 (DDB2)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102974256 (DDB2)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102974256 (DDB2)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102974256 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
102974256
NCBI-ProteinID:
XP_007121294
UniProt:
A0A2Y9FEW6
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MAPRKRPETQKTPEVVVRPKSKRNRSPRELEPEAKKLCLKGPGPSRRFDSGCLWAGLASL
RVPPPCSIIRALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHP
THPSTLAVGSKGGDILVWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGTT
RLQDFKGNTLRVFASSGTCNFWFCSLDVSVKSRVVVTGDNVGNVILLNMDGRELWNLRMH
KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKSSFLYSLLHRHPVNAAHFSPDGA
QLLTTDQKSEIRVYSASQWDCPPSLIPHPHRHFQHLTPIKATWHPRYNLIVVGRYPDPNF
KSCTSHELRTIDVFDGSSGKMMYQLYDPESSGIMSVRLGPSNNNGRKQGFTLPYWIKNDQ
KLILMCPSPSTFIPSSCLSPCLCSSMSSILWGTHWPL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaggaaacgcccagaaacccagaagacccccgaggtggttgtgcgccccaag
agcaagaggaacagaagcccccgggagctggagcccgaggccaagaagctctgtttgaag
ggccccggtcctagcagaagatttgactcaggctgcctttgggcggggttggctagcctg
cgggtcccgccaccatgcagcatcatcagggccctccaccagcataagctgggcacagct
gcctggccatcactacagcagggtctccagcagtcctttttgaactctctggcttcttac
cggatattccaaaaggctgccccttttgacaggagggccacatccctggcgtggcaccca
actcaccccagcaccctggctgtgggttccaaagggggagatatcttggtctggaacttt
ggcataaaggacaaacccactttcattaaagggattggagctggagggagcatcactggg
ctgaagtttaaccctctcaataccaaccagtttttcacctcctcaatggagggaacaact
aggctgcaagactttaaaggcaacactctccgagtttttgccagctcaggcacctgcaac
ttctggttttgcagcctggatgtgtctgtcaaaagccgagtggtggtcacaggagataac
gtggggaacgtgatcctgctgaacatggacggcagggagctttggaatctgagaatgcac
aaaaagaaagtgacccacgtggccctgaacccgtgctgtgattggttcctggccacggcc
tctgtagatcaaacagtgaaaatctgggacctgcgccaggttagagggaaatccagcttc
ctctactcgctgctgcacaggcatcccgtcaacgcagctcatttcagtcccgacggtgcc
cagctcctgaccactgaccagaagagtgagatccgggtttactctgcctcccagtgggac
tgccccccaagccttatcccacaccctcatcgccacttccagcacctgacacccatcaag
gcaacctggcatcctcggtacaacctcattgtcgtgggccgatacccagatcctaatttc
aaaagttgtacctcccatgaattaaggacaatcgatgtgtttgatggaagctcaggaaag
atgatgtatcagctgtatgacccagaatcttctggtatcatgtcggtgaggcttgggccc
tcaaataataatgggaggaagcagggattcaccttaccttattggatcaaaaacgaccag
aaattaatcctcatgtgcccttctcccagtaccttcattccctcctcatgcttatcccct
tgtctctgcagctcaatgagttcaatcctatgggggacacactggcctctgtga
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