Physeter catodon (sperm whale): 102985232
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Entry
102985232 CDS
T06011
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102985232 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102985232 (DDX23)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102985232 (DDX23)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102985232 (DDX23)
Complex C
U5 SnRNP specific factors
102985232 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
102985232
NCBI-ProteinID:
XP_007107578
Ensembl:
ENSPCTG00005009112
UniProt:
A0A2Y9ERK1
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Position
6:89986218..90007535
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AA seq
818 aa
AA seq
DB search
MAGELADKKDREASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRERRRGGSRSR
SRSRSKSTERERRHKERERDKERDRNKKDRDRDKDGHRRDRKRSSLSPGRGKDFKSRKDR
DSRKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVE
ERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKD
KSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRG
FIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKL
DEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAI
PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ
QIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSR
CTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQT
VMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQG
FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD
VAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQA
ILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgataagaaggaccgtgaggcatcaccttccaaggaggaaagg
aagagatctcggactcctgacagagaacgggatagagaccgagaccggaagtcttcccca
tctaaagataggaaacggcatcgttcaagggaaaggcgtcgaggaggcagccgttctcgt
tcccgttcccgttccaagtctacagaaagagaacgccggcacaaagaacgagagcgagat
aaggagcgtgatcggaataagaaggaccgagatcgggataaggatgggcacaggcgggac
cgcaagcgatccagtttatctcctggccgaggaaaagattttaaatctcggaaagacaga
gactctaggaaggatgaagaggatgaacatggtgataagaagcctaaggcccagccatta
tctctggaggaacttctggccaagaaaaaggctgaggaagaagctgaggctaagcccaag
ttcctctctaaagcagaacgagaggctgaagccctaaagcgacggcagcaggaggtggag
gagcggcagaggatgcttgaagaagagaggaagaaaaggaaacagttccaagacttgggc
aggaaaatgttggaagaccctcaggaacgggaacgtcgggaacgcagggaaaggatggag
cgggagaccaacggaaatgaggatgaggaagggcggcagaagatccgggaggagaaggat
aagagcaaggagctgcatgccattaaggagcgttacctgggtggcatcaagaagcggcgc
cggacgaggcatctcaatgaccgcaagtttgtctttgagtgggatgcatctgaggacact
tccattgactacaaccccctgtacaaagaacggcaccaggtgcagttgttggggcgaggc
ttcattgcaggcattgacctaaagcagcagaaacgagagcaatcacgtttctatggagac
ctaatggagaagaggcggacgctggaagaaaaggagcaggaggaggcaagactccgcaaa
cttcgtaagaaggaagccaagcaacgctgggatgatcggcattggtcccagaagaagttg
gatgagatgacagacagggactggcggatcttccgtgaggactacagcatcaccaccaaa
ggtggcaagatccccaatcccatccgatcctggaaagactcttctctgcctccacacatc
ttggaggtcatcgataagtgtggctacaaggagccgacacctatccagcgtcaggcaatt
cccattgggctacagaatcgtgacatcattggagtggctgagaccggcagcggcaagaca
gcagccttcctcatcccgttgctcgtctggattaccactctccccaaaattgacaggatc
gaagagtcagaccagggcccttacgccatcatcctggcccccactcgtgagctggctcag
cagattgaggaagagaccatcaagtttgggaagccgctaggcatccgcactgtggctgtc
attggcggcatctccagagaagaccagggcttcaggctgcgcatgggttgtgagatagtg
attgcaactccaggacgtctgattgatgtgctggagaaccgctacctggtgctgagccgc
tgtacctatgtggttctggatgaggcagacaggatgattgatatgggctttgagccagac
gtccagaagatcctggagcacatgcctgtcagcaaccagaagccggacacagatgaggcc
gaggaccctgagaagatgttggccaacttcgagtcaggaaaacataagtaccgccaaaca
gtcatgttcacggccaccatgcccccagcggtggagcgtctggcccggagctatcttcgg
cgacctgctgtggtgtacatcggctctgccggcaagccccacgaacgtgtggaacagaag
gtcttcctcatgtcagagtctgaaaagaggaaaaagctgctggcaatcttggagcaaggc
tttgatccccccatcatcatttttgtcaaccagaagaagggctgtgatgttttggccaaa
tccctggagaagatggggtacaatgcttgtacgctgcatggtggaaaaggccaggagcag
cgagagtttgcactatccaacctcaaggctggggccaaggatattttggtggctacagat
gtggcgggtcgtggtatcgacatccaagatgtgtctatggttgtcaactatgatatggcc
aaaaacattgaagattatatccaccgcattggccgcacgggacgagcaggcaagagtggt
gtggccatcaccttcctcaccaaagaggactctgctgtgttctatgagctgaagcaagcc
atcctggagagcccggtgtcctcctgccccccagagctagccaaccaccccgatgcccag
cacaagccaggcaccatcctcaccaagaagcgccgggaagagaccatctttgcctga
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integrated database retrieval system
