Physeter catodon (sperm whale): 102988252 Help Entry 102988252         CDS       T06011                                  Gene name CDH1 Definition (RefSeq) cadherin-1   KO K05689   cadherin 1, type 1, E-cadherin Organism pcad  Physeter catodon (sperm whale) Pathway pcad04015   Rap1 signaling pathway pcad04371   Apelin signaling pathway pcad04390   Hippo signaling pathway pcad04514   Cell adhesion molecules pcad04520   Adherens junction pcad05100   Bacterial invasion of epithelial cells pcad05200   Pathways in cancer pcad05213   Endometrial cancer pcad05216   Thyroid cancer pcad05218   Melanoma pcad05219   Bladder cancer pcad05226   Gastric cancer Brite KEGG Orthology (KO) [BR:pcad00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     102988252 (CDH1)    04390 Hippo signaling pathway     102988252 (CDH1)    04371 Apelin signaling pathway     102988252 (CDH1)   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     102988252 (CDH1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     102988252 (CDH1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102988252 (CDH1)   09162 Cancer: specific types    05226 Gastric cancer     102988252 (CDH1)    05216 Thyroid cancer     102988252 (CDH1)    05218 Melanoma     102988252 (CDH1)    05219 Bladder cancer     102988252 (CDH1)    05213 Endometrial cancer     102988252 (CDH1)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     102988252 (CDH1) Chromosome and associated proteins [BR:pcad03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Other centriole associated proteins     102988252 (CDH1) Cell adhesion molecules [BR:pcad04515]  Cadherins   Major cadherins    102988252 (CDH1) CD molecules [BR:pcad04090]  Proteins   102988252 (CDH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_C Cadherin_pro Cadherin_3 Motif Other DBs NCBI-GeneID:  102988252 NCBI-ProteinID:  XP_007110828 UniProt:  A0A2Y9EXB8 LinkDB All DBs Position 17 AA seq 883 aa AA seqDB search MGPPCRNLSALLLLLQVSSWLCHEPEPCNPGFGAESYTFTVPRLRLERGRVLGRVSFEGC TGLPRTVYVSDDTRFKVGTDGVVAVKRPLHLHHPEMSFLVHAWDFTRRKLSTKVTLKAVV HHHRHHHHHDSPSGTQTEVLTFPSSHHGLRRQKRDWVIPPISCPENEKGPFPKALVQIKS NREKETEVFYSITGQGADTPPLHVFIIERETGWLKVTEPLDREDIAQYILFSHAVSSNGQ AIEEPMEIVITVTDQNDNKPEFTQEVFKGSVVEGALPGTSVMEVSATDADDDVNTYNAAI AYTILSQEPVLPHNKMFTINRDTGVISVLTTGLDRESFPTYTLVVQAADLQGEGLSTTAT AVITVTDANDNPPIFNPTTYVGSVLENEANVVITTLTVTDADVPNTPAWEAVYTILNDDE KQFVVITDPVTNEGILKTAKGLDFEAKQQYILYVQVTNVASFEVTLPTSTATVTVDVIDV NEAPIFMPPQKKVNVPEDFGLGLEITSYTAQEPDRFMEQKITYRIWRDAANWLEINPDTG AISTRAELDRENVEHVKNSTYTALIIATDNGSPPATGTGTLLLFLDDVNDNGPIPEPRYM DFCQRNPQPHIINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQEHESLIFKPKKTLEV GDYKINLKLIDNQNKDQVTTLDVHVCDCEGVVSNCRQAGPSAQAGLQLPAILGILGGILA FLILILLLLLLVRRRRVVKEPLLPPEEDTRDNIYYYDEEGGGEEDQDYDLSQLHRGLDAR PEVTRNDVAPTLLSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGSG SEAASLSSLNSSESDQDQDYDYLNEWGSRFKKLADMYGGGEDD NT seq 2652 nt NT seq  +upstreamnt  +downstreamnt atgggccctccgtgccgcaacctctctgcgctcctgctgctgctgcaggtctcatcgtgg ctctgccacgagccggagccctgcaatcccggctttggcgccgagagctacacgttcacc gtgccccggcttcgcttggagagaggccgagtcctgggcagagtgagttttgaaggatgc accggtctaccaaggacagtctatgtttctgatgacacccgattcaaagtgggcacagat ggcgtggttgcagtcaaacggcctttacaccttcatcatccagagatgagctttctcgtc catgcctgggacttcacccgcaggaagctctccaccaaagtgaccctgaaggcagtagtg caccaccatcgccaccaccatcatcatgactctccctctggaacccagacagaagtgctc acatttcccagctcccaccatggtctcaggagacagaagagagactgggttattcctcct atcagctgcccagaaaatgagaaaggcccgtttcctaaggctctggttcagatcaaatct aacagggaaaaagaaaccgaagttttctacagcatcactggccaaggagccgacacaccc cctcttcatgtgtttattattgaaagagaaacaggatggctaaaggtgacggagcctctg gatagagaagacattgcccagtacattctcttctctcatgctgtgtcttcaaacgggcaa gcaatcgaggagccgatggagattgtgatcaccgtgactgatcagaatgacaacaagcct gagttcacccaggaggtcttcaaggggtctgtcgtggagggcgctcttccagggacctct gtgatggaggtctcggccacagacgcagacgatgatgtgaacacctacaacgctgccatt gcttacaccatcctcagccaagagcctgtgctgccacacaacaaaatgttcaccatcaac agggacacgggtgtcatcagtgtgctcaccaccggtctggaccgggagagttttcccaca tataccctggtggttcaagctgcagacctgcaaggtgaaggcttaagcacaaccgcaaca gctgtgatcacagtcactgacgccaacgataaccctcccatcttcaacccaaccacgtac gtggggtcggtgcttgagaacgaggctaacgtggtcatcaccacactcacagtgaccgat gccgacgtccccaataccccagcgtgggaggccgtttacacaatattaaacgatgacgag aagcagtttgttgtcatcacagacccagtaaccaatgaaggcattttgaagacggctaag ggcttggattttgaggccaagcagcagtacatcctgtatgtgcaagtgactaatgtggcc tcctttgaggtcactctccccacttccacagccactgtcaccgtggacgtgatagatgtg aatgaagcccccattttcatgcctcctcagaagaaagtgaatgtgcccgaggacttcggc ttgggcctggagatcacgtcctacaccgcccaggagccagacagatttatggaacagaag atcacgtatcggatttggagggacgctgccaactggctggagattaatccggacacgggt gccatttccactcgggctgagttggacagagagaacgtcgagcatgtgaagaacagcaca tacacggccctcattatagccactgacaatggttctccacctgctactggaacgggaacc ctgctcctattcctcgatgatgtgaatgacaatggccccataccagaacctcggtacatg gacttctgccagaggaatccacagcctcatatcatcaacatcattgatcctgatcttccc cccaacacttctcccttcacagcagaactaacacatggggcaagtgtcaactggaccatt gagtacaatgaccaagaacatgaatctctgatttttaagccaaagaaaaccctagaggtg ggtgactacaaaatcaatctcaagctcatagacaaccagaacaaagaccaagtgaccacc ttagatgtgcacgtgtgtgactgtgaaggggtcgtcagcaactgtaggcaggccgggcct tccgcccaagcaggattgcaacttcccgccattctggggattcttggaggcattcttgct tttctgatcctgattctgctgcttctgctacttgttcggaggagaagggtagtcaaagag cccttactgcccccagaagaagatacccgggacaacatttattactatgatgaagaagga ggtggagaagaagaccaggactatgacctgagccagctacacaggggcctggatgctcgg cccgaagtgactcgcaatgatgtggctccaaccctcctgagtgtgccccagtatcgaccc cgacctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggcagctgac agtgaccccacggccccaccctatgactctttgctggtgtttgattatgaaggaagcggt tccgaagctgctagtctgagctccctgaactcctcggagtcagaccaagaccaggactat gactacctgaacgaatggggcagtcgcttcaagaagttggcagacatgtatggaggcggc gaggacgactag

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