Physeter catodon (sperm whale): 102988834
Help
Entry
102988834 CDS
T06011
Symbol
SHARPIN
Name
(RefSeq) sharpin isoform X2
KO
K20894
shank-associated RH domain-interacting protein
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04217
Necroptosis
pcad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102988834 (SHARPIN)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102988834 (SHARPIN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102988834 (SHARPIN)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
LUBAC complex
102988834 (SHARPIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
102988834
NCBI-ProteinID:
XP_007118248
Ensembl:
ENSPCTG00005011225
UniProt:
A0A2Y9FAF7
LinkDB
All DBs
Position
15:646993..651150
Genome browser
AA seq
461 aa
AA seq
DB search
MSIVGEAGGSDGSNARAAPGTPGSRPQFPAGGGAQRPEATEAGSWGRAGTGPEMAPPAGG
AAAASDPGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELLGAGPGAV
SLEWPLESISYTVRGPSQHELQPPPGGPGTLSLHFANPQEAQRWAALVRGATVEGQNGSD
SLTPALGSETCPVSPPSLEVPATKAPQPKVDLPWRPGDLMEKEDLAGHLTQAIEGGDEKR
AAQAAAILAQHHVALSIQLQEACFPSGPIRLQVTVEDAASSAHVSLPVHPHSTIGALQEQ
VFSEFGFPPAVQRWVIGRCLCVPEYSLAFYGVRRDGDPAFLYLLSAPREAPGRSPQRPQK
MDGELGRLFPQSLGLPQAPQPAGSSLPNPLQPGWPCPSCTFINAPSRPGCEMCSTRRPCA
WDPLPPASTQQLPKVTRREDGPSLPGPSSLDPLLNLSGNLC
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcgtgggcgaagcgggagggtcagacggctccaacgctcgggcggctcccgga
accccaggctcgcggccccagtttccggccggtggaggcgctcagcggcccgaggccacg
gaagcgggctcgtggggccgggccgggaccggaccggagatggcgccgccggcgggcggc
gcggctgcggcctcggaccccggctcggccgcggtgctcctggcggtgcacgccgcggtg
aggccgctgggcgcggggccggacgcagaggcgcagctgcggaggctgcagctgagcgcg
gaccccgagcgcccagggcgcttccggctggagctgcttggagcggggcccggggcggtc
agtctggagtggcccttggagtccatctcctacaccgtccgaggccccagccagcatgag
ctgcagcctccaccaggagggcctgggactctcagcctgcacttcgccaaccctcaggaa
gctcagcggtgggcagccctggtccgaggtgccaccgtggaaggacagaatggcagtgac
agcctgaccccagccctaggctcagaaacgtgccctgtttccccgcccagtctcgaagtg
cctgcaaccaaggccccccagcccaaggtggatcttccttggcgccctggagacttgatg
gagaaagaggacctagcagggcacctgacccaggccatagagggtggggatgagaagcgg
gcagcccaagcagcagccatcctggcccagcatcacgtggccctcagcatccagctccag
gaggcctgcttcccttctggccccatcaggctacaggttacagttgaagatgctgcatcc
tctgcccacgtctcgctgccagtccacccccactccaccatcggggccctccaggagcag
gtattctcggagtttggcttcccaccggctgtgcagcgctgggtcatcgggaggtgcctg
tgtgtccctgaatacagccttgctttctacggggtccggcgggatggggaccctgctttc
ctctacctgctctcagccccccgagaggccccaggacgcagtccccagcgcccccagaag
atggatggggaactaggccgcctgtttcctcagtcactggggctgccccaagcccctcag
ccagcgggctccagcctgcccaacccccttcagcccggctggccctgcccttcctgcacc
ttcatcaatgccccaagccggcccggctgtgagatgtgcagcacccggaggccctgtgct
tgggacccccttcccccagcctccacccagcagctaccaaaggtcacaaggagagaggat
ggcccttcccttccaggcccaagttccctggaccccctcctgaacctctcagggaacctc
tgctga
DBGET
integrated database retrieval system