KEGG   Physeter catodon (sperm whale): 102989210Help
Entry
102989210         CDS       T06011                                 

Gene name
COLGALT2
Definition
(RefSeq) procollagen galactosyltransferase 2
  KO
K11703  collagen beta-1,O-galactosyltransferase [EC:2.4.1.50]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad00310  Lysine degradation
pcad00514  Other types of O-glycan biosynthesis
pcad01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102989210 (COLGALT2)
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    102989210 (COLGALT2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pcad01003]
    102989210 (COLGALT2)
Enzymes [BR:pcad01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.50  procollagen galactosyltransferase
     102989210 (COLGALT2)
Glycosyltransferases [BR:pcad01003]
 O-Glycan biosynthesis
  O-linked Gal type
   102989210 (COLGALT2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glyco_transf_25 Glyco_tranf_2_4 Anp1 Glyco_transf_92 Aminotran_4
Motif
Other DBs
NCBI-GeneID: 102989210
NCBI-ProteinID: XP_023989661
UniProt: A0A2Y9TFG0
LinkDB All DBs
Position
4
AA seq 626 aa AA seqDB search
MAASPAAPLAWALLLLSWALLRGGCRARFAAEPDSEDDEGEAVVFPESPLQRPTVMVAVL
ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLKNVQRAYHYVEWRP
MDEPESYPDEIGPKHWPGSRFAHVMKLRQAALQTAREKWSDYILFIDVDNFLTNPQTLNL
LIAENKTVVAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRLGCFPVPMVHSTFL
IDLRKEASDKLMFYPPHQDYTWTFDDIIVFAFSSRQAGIQMHLCNREHYGYLPIPLKPHQ
TLQEDIENLIHVQIEAMIDHPPMEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKTLNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
WKEVIDQELEKTLVIEDDVRFEHQFKKKLMKLMDDIDRVQLDWELIYIGRKRMQLKEPEK
AVPNVVNLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPIMYNKHPVAEYME
HYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQGH
IYRNAKNTEALPPPTSLDTVPSRDEL
NT seq 1881 nt NT seq  +upstreamnt  +downstreamnt
atggccgcaagccccgccgcccccctggcctgggcgctgctactcctctcgtgggctctg
ctccgcggcggctgccgggcgcgcttcgctgccgagccggactccgaagacgacgaaggg
gaggcggtagtattccccgagtcgcccctgcagagacccacggtgatggtggccgtcctc
gcgcgtaacgctgcgcacacgctgcctcacttcctcggctgcctggagcggctggactac
cccaagagcaggatggccatctgggcggccactgatcacaatgtggataatacaacagaa
atactcagggagtggttgaaaaatgtccagagagcctatcactatgtggagtggaggcct
atggatgaacctgagtcttatcctgatgaaattggaccaaagcactggcctggctcccgt
tttgcccatgtgatgaaactacgacaggcagcccttcaaactgcgagggaaaaatggtca
gactacattctgttcatagatgttgacaacttcctgactaatccacagaccctcaatcta
ctgattgcagaaaacaaaactgttgtggcccccatgctggagtctcggggcctgtactcc
aatttctggtgtggaatcacacctcagggcttctataaacggaccccagactatcttcag
attagagaatggaagaggttgggctgctttccggtccccatggtccactccacattccta
attgacctcaggaaggaagcctctgacaagctgatgttctaccccccgcaccaggactac
acctggacctttgatgacatcattgtctttgccttctccagcaggcaagcaggcatccag
atgcatctctgcaacagagagcactacggctacctgcccatccccctgaagccccatcag
accctacaggaggacattgagaacctcatccatgtgcagatagaagcaatgattgaccat
cctccaatggaaccttcccagttcgtctcagttgtccctaaatatccagacaagatggga
ttcgatgagattttcatgataaacctcaagcgcagaaaggacaggcgggaccggatgtta
cgtaccctgtacgagcaggagattgaggtcaagattgtcgaggctgtggatggaaagaca
ctcaacacaagccagctgaaggccctgaatattgaaatgctgcccggatatcgagatccc
tactcctccaggcctctaactaggggtgaaattggctgcttccttagccactactctgtc
tggaaagaggtaattgaccaagagctggagaagactcttgttattgaggatgatgtgcgt
tttgaacatcagtttaagaagaagctcatgaagctgatggatgatattgatcgagtccag
ctggattgggaactgatttatattggcaggaagaggatgcaactaaaagagccagagaaa
gctgtgcccaatgtggtaaatctggtcgaagctgactattcttactggactctgggctat
gtcatctctctggaaggagcacagaagcttgttggagccaatccttttgggaagatgcta
ccagtggatgagtttctgccaatcatgtacaacaagcatcctgttgctgagtacatggag
cattacgaatccagggacttgaaagccttctctgcagaacccttgctcatctacccaaca
cactacacaggccagccagggtatctgagtgacacggagacctcaaccatctgggacaat
gagacagtggccactgactgggacaggacacatgcctggaagtccaggaagcagggtcac
atctaccgcaatgccaagaacacagaggccctgccaccgccaacctccctggacactgtg
ccttcgagagatgagctatga

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