KEGG   Physeter catodon (sperm whale): 102990900
Entry
102990900         CDS       T06011                                 
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04145  Phagosome
pcad04210  Apoptosis
pcad04530  Tight junction
pcad04540  Gap junction
pcad04814  Motor proteins
pcad05010  Alzheimer disease
pcad05012  Parkinson disease
pcad05014  Amyotrophic lateral sclerosis
pcad05016  Huntington disease
pcad05020  Prion disease
pcad05022  Pathways of neurodegeneration - multiple diseases
pcad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102990900
  09143 Cell growth and death
   04210 Apoptosis
    102990900
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102990900
   04540 Gap junction
    102990900
  09142 Cell motility
   04814 Motor proteins
    102990900
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102990900
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102990900
   05012 Parkinson disease
    102990900
   05014 Amyotrophic lateral sclerosis
    102990900
   05016 Huntington disease
    102990900
   05020 Prion disease
    102990900
   05022 Pathways of neurodegeneration - multiple diseases
    102990900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102990900
   03036 Chromosome and associated proteins [BR:pcad03036]
    102990900
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcad04812]
    102990900
   04147 Exosome [BR:pcad04147]
    102990900
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102990900
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     102990900
Cytoskeleton proteins [BR:pcad04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    102990900
Exosome [BR:pcad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102990900
  Exosomal proteins of other body fluids (saliva and urine)
   102990900
  Exosomal proteins of colorectal cancer cells
   102990900
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 102990900
NCBI-ProteinID: XP_054941618
Ensembl: ENSPCTG00005008408
UniProt: A0A9W2WRD3
LinkDB
Position
6:89834626..89838303
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAADNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
actattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaaa
cacgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
gataactatgcccgaggtcactacaccattggcaaggagatcattgaccttgtcttggac
cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc
tttggcgggggaactggttccgggttcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccatttacccagcccctcaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaaccttgatattgag
cgcccaacctacacgaatcttaaccgccttattagccagattgtgtcctccatcactgct
tccctgcgatttgatggagccctgaatgttgatctgacagaattccagaccaacctggtg
ccctatcctcgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgcgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggcgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaagttggcattaattaccagcctccc
actgtggtacctggtggagacctggccaaagtacagcgagctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagagggagaggaagaaggagaagagtactaa

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