Physeter catodon (sperm whale): 102995524
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Entry
102995524 CDS
T06011
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102995524 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102995524 (TRIM71)
04121 Ubiquitin system [BR:
pcad04121
]
102995524 (TRIM71)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102995524 (TRIM71)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102995524 (TRIM71)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102995524 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
102995524
NCBI-ProteinID:
XP_023972265
Ensembl:
ENSPCTG00005009209
UniProt:
A0A2Y9S7S2
LinkDB
All DBs
Position
18:complement(55728442..55786828)
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AA seq
870 aa
AA seq
DB search
MASFSETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGATARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAAAGAGGHSNHRHHAHHAHPRAAASAPPPLPPAPQPPAPPRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPTAAAAAAQQLGLGPSFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPIC
RECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAK
VVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAV
QQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFV
SSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGA
EVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGS
EGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAG
VACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSD
TRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDC
QSARFLGSEGTANGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGF
GQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttctccgagaccgacttccagatctgcctcctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccccggggctacggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgccgggagagccgctcaaactgcgctgccctgtgtgcgaccagaaggtcgtgctg
gccgaggcggcgggcatggacgcgctgccctcgtccgccttcctactcagtaacctgctt
gacgccgtggtggccacggccgacgagccgccgcccaagaacgggcgggccggcgccgcg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgct
gctgcctcggcgccgccgccgctcccgccagcgccgcagccgcccgcgccgccccgctca
gcgcccggcggccccgcggcctccccgtcggcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgccttgactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgccttaccaaggaccactacatcgag
cgcggcccgcccggccccacagcggccgccgccgcggcacagcagctcgggctcgggccg
tccttccccggcgcgcccttctccatcctttcggtcttccccgagcgcctcggcttctgc
cagcaccacgacgacgaggtgctgcacctgtactgtgacacgtgctcagtgcccatctgc
cgggagtgtactgtgggccggcatggcggccacagcttcgtctacctccaggaggcgctg
caggactcacgggcgctcaccatccagctgctggctgatgcccagcagggccgccaggcc
atccagctgagcatcgagcaggcccagacggtggcagagcaggtggagatgaaggcaaaa
gtggtacagtcggaggtcaaagccgtgactgcgagacacaagaaggccctggaggagcgg
gagtgtgaactgctgtggaaggtagagaaaatccgccaggtgaaagccaagtccctgtac
ctgcaggtggagaagctgcggcaaaacctcaacaagctggagagcaccatcagcgccgtg
cagcaggtcctggaggaggggcgggcgctggacatcctgctggcccgagaccgcatgctg
gcgcaggtgcaggagctcaagaccgtgcgcagcctcctgcagccccaggaggacgaccgg
gtcatgttcacaccccctgaccaggccctctacctcgccatcaagtccttcggctttgtc
agcagcggggccttcgcgccgctcaccaaggccacgggcgacggcctcaagcgggccctc
cagggcaaggtggcctccttcactgtcatcggctacgaccacgacggggagccccgcctc
tcaggaggagacctcatgtcggccgtggtcctgggccctgacggcaacctgtttggtgcg
gaggtgagcgaccaacagaacgggacatacgtggtgagctaccggccgcagctggagggc
gagcacctggtgtctgtcaccctgtgcaaccagcacatcgagaacagccccttcaaggtg
gtggtcaagtccggccgcagctacgtgggcatcgggctcccgggcctgagcttcggcagt
gagggtgacagcgatggcaagctgtgccggccctggggcgtgagcgtggacaaggagggc
tacatcgtggtcgccgaccgcagcaacaatcgcatccaggtgttcaagccctgtggcgcc
ttccaccacaagttcggcactctgggctcccggcccgggcagttcgaccggcccgccggc
gtagcctgtgacacctcccgcaggatcgtggtggctgacaaggacaatcatcgcatccag
atcttcacctttgagggccagttcctcctcaagttcggtgagaagggcaccaaaaatggg
caatttaactacccttgggatgtggcggtgaattccgagggcaagatcctggtctccgac
acgcggaaccaccggatccagctgttcgggcccgatggggtcttcctgaataagtatggc
ttcgagggggctctctggaagcactttgactccccaaggggggtggctttcaaccacgag
ggccacttggtggtcaccgacttcaacaaccaccggctcctggtcattcacccggactgc
cagtcggcccgcttcctgggctcagagggcaccgccaatgggcaattcctgcgcccacag
ggcgtggccgtggaccaggaggggcgcatcatcgtggccgattccaggaaccaccgggtg
cagatgttcgagtccaacggcagcttcctgtgcaagtttggcgcccagggcagtggcttt
gggcagatggaccggccctccggcatcgctgtcacgccggatgggatgattgtcgtggtg
gactttggcaacaatcgaatcctcatcttctaa
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integrated database retrieval system
