Physeter catodon (sperm whale): 102996192
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Entry
102996192 CDS
T06011
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102996192 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcad01007
]
102996192 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102996192 (RARS1)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102996192 (RARS1)
Enzymes [BR:
pcad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
102996192 (RARS1)
Amino acid related enzymes [BR:
pcad01007
]
Aminoacyl-tRNA synthetase
Class I (G)
102996192 (RARS1)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102996192 (RARS1)
Prokaryotic type
Other AARSs
102996192 (RARS1)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102996192 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
102996192
NCBI-ProteinID:
XP_007110094
Ensembl:
ENSPCTG00005001479
UniProt:
A0A2Y9EWG1
LinkDB
All DBs
Position
2:206840..242073
Genome browser
AA seq
660 aa
AA seq
DB search
MDGLVAHCSARLLQQEKEITFLTAEIDRLKNRSCSEAASNLEQLREENLKLKYRLNILQK
SLQAERSKPTKNMLNINSCLQEVFGCAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMG
ISQMLKTKEQKVNPREIAGNIIKHLPDNEYIEKVEIAGPGFINVHLRKGFVSQQLTNLLV
NGVKLPAIGANKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGD
WGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSK
NPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDG
RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSLHFQTVF
GGAQMIGWYDPEVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEK
ERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLASIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFLHTLCDY
IYELATTFTEFYDSCYCVEKDRQTGEVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacggcttggttgctcattgctccgcgcggctgctgcagcaggagaaagagattacg
tttctgactgctgaaattgatcggttgaaaaaccgcagctgttcagaagctgcttcaaat
ttggaacagttgcgggaagaaaatttaaaattaaagtatcggctgaatatccttcaaaag
agtcttcaagcagaaaggagcaaaccaactaaaaatatgcttaacatcaatagttgccta
caagaggtctttggttgtgccattaaggctgcctatccagatttggaaaatcctccactg
atagtgacaccaagtcaacagcccaagtttggggactatcaatgtaatagtgctatgggt
atctctcagatgctcaaaaccaaggaacagaaagttaatccaagggaaattgctggaaac
attatcaaacacctcccagacaatgaatatattgaaaaagttgaaattgctggtcctggt
tttattaatgtccacttaagaaagggctttgtatcacaacagttgaccaacctcttggtg
aatggtgttaaactacctgccattggagcgaacaaaaaggttgtagttgacttttcctct
cccaacatagctaaagagatgcatgtaggccatctcaggtcaacgatcataggagagagc
atgtgccgcctctttgagtttgcaggatataacgtgctgcgattaaaccatgtaggagat
tggggaacccagtttggcatgctcattgctcacctgcaagacagatttccggattaccta
acagtttcacctcccattggggatcttcaggctttttataaggaatccaagaagaggttt
gataccgaggaggaatttaagaagagagcataccagtgtgttgttttactccagagtaaa
aatccagacatcataaaagcttggaagcttatctgtgatgtctcccgccaagagtttaat
aaaatctatgaggcgttggacatttctttaatagagaggggagaatccttctatcaagat
aggatgaatgatattgtgaaggagtttgaagatagaggatttgtgcaagtggatgatggc
agaaagattgtgtttgttccaggatgttccataccattaaccatagtaaaatcagatgga
ggttatacctatgatacatctgacctggctgctattaaacaaagactatttgaggaaaaa
gcagatatgatcatctatgtggtggacaatggacaatctttacacttccagacagtattt
ggtggtgctcaaatgattggttggtatgaccctgaagtaactcgagtgtctcatgctgga
tttggtgtggtgctgggggaagacaagaagaagtttaaaacacgatcaggtgaaacagtg
cgcctcatagaccttctggaagaaggactaaaacgctccatggacaaattgaaggaaaaa
gaaagagacaaggtcttaaccacagaggaattgaaggctgctcagacatctgttgcttat
ggctgtatcaaatatgctgatctttcccataaccggttgaatgactatatcttctccttt
gacaaaatgctggatgacagaggaaatacagcggcttacttgttgtatgccttcactaga
atcaggtcgattgcacgtctggccagtattgatgaagaaatgctccagaaagctgctcga
gagaccaagatcattttggaccatgagaaggaatggaaactaggccggtgcattttgcgg
ttccctgaggttctgcagaagatcttagatgacttatttctccacactctctgtgattat
atctatgagctggcaactactttcacagaattctatgatagctgctattgtgtggagaaa
gatcgacaaactggagaagtattgaaggtgaacatgtggcgtatgctgctatgcgaagca
gtagctgctgtcatggccaaggggtttgatatcctgggaataaagcctgtccaaagaatg
taa
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