KEGG   Paraburkholderia caffeinilytica: DSC91_004361
Entry
DSC91_004361      CDS       T06448                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pcaf  Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:pcaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcaf03019]
    DSC91_004361
   03009 Ribosome biogenesis [BR:pcaf03009]
    DSC91_004361
Messenger RNA biogenesis [BR:pcaf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DSC91_004361
Ribosome biogenesis [BR:pcaf03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    DSC91_004361
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AXL51620
LinkDB
Position
2:complement(1106238..1106852)
AA seq 204 aa
MTDILAPSEEPTLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRLVEGPVLAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSAYVPPGKSPMCGNS
ICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASQVPEAPAE
NT seq 615 nt   +upstreamnt  +downstreamnt
atgactgacatcctcgccccctccgaagagccgacgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagccggacaccgaccgcatcatcgaaatc
gcggtggtggtgacgaattcgacgcttgaccgtctggtggaagggccggtgctggcgatt
catcagagcgacgagacgctcgccaaaatggaccagtggaaccagaacacgcatgggcgc
tcgggcttgatcgaccgcgtgaaggcgtcgacggtgagcgaagccgacgccacggaacag
attcgcgactttctcagcgcttatgtcccgccgggcaaatcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccggatctggagcgcttctttcac
taccgcaatctcgacgtcagcacgctgaaggagctgtgccgccgctggcagccggcgatc
tacaagggtttccagaaacgcgccatgcacacggcgctggccgacatccatgaatcgatc
gacgagctgaagtattaccgtgagcacttcctgattccggcggcctcgcaggtgccggaa
gcgcctgcggagtaa

DBGET integrated database retrieval system