Paraburkholderia caffeinilytica: DSC91_004763
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Entry
DSC91_004763 CDS
T06448
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSC91_004763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaf03400
]
DSC91_004763
DNA repair and recombination proteins [BR:
pcaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSC91_004763
RecFOR pathway proteins
DSC91_004763
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
IMS_HHH
Transposase_20
Cdd1
HHH_3
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AXL51927
LinkDB
All DBs
Position
2:1517850..1518431
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AA seq
193 aa
AA seq
DB search
MIGRIAGVLLEKNPPHLLVDCNGVGYEVDVPMSTFYNLPSTGERVVLLTQMIVREDAHLL
YGFGTAEERSTFRELLKITGIGARMALAVLSGMSVHELAQTVTMQDAARLTRVPGIGKKT
AERLLLELKGKIGADLGTMAGAASATNHASDILNALLALGYSEKEALTAVKNVPAGTGVS
EGIKLALKALSKA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcgcattgccggcgttctgctggaaaaaaacccgccgcatctgctcgtcgac
tgcaacggcgtcggttacgaagtcgatgtgccgatgagcacgttctacaacctgccctcg
accggcgaacgcgtggtgctgctcacgcaaatgatcgtgcgcgaagacgcgcacctgctg
tacggcttcggcaccgccgaggaacgctcgacgttccgcgaactgctgaagatcacgggc
atcggcgcgcgcatggcgctcgccgtgctatccggcatgagcgtgcatgaactggcgcaa
accgtcacgatgcaggacgcagcgcgcctgactcgcgtgcctggcatcggcaagaagaca
gcggagcggctactcctcgaactgaagggcaagatcggcgccgacctgggcacgatggcc
ggcgcggcgtctgcaaccaaccatgcctccgatatcctgaacgcgctgctcgcattgggt
tactccgaaaaagaagcgttgaccgccgtcaaaaacgtaccggccggcaccggcgtttcg
gaaggcatcaagctcgcgctgaaggccttgtccaaagcttga
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