Pomacea canaliculata (golden apple snail): 112570046
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Entry
112570046 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcan04040
]
112570046
Ion channels [BR:
pcan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112570046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
GPHH
Na_trans_cytopl
Motif
Other DBs
NCBI-GeneID:
112570046
NCBI-ProteinID:
XP_025104021
LinkDB
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Position
LG8:26658454..26743825
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AA seq
1906 aa
AA seq
DB search
MEEDAAMEWTPFRLFTRESLFNIERRIAEEQAAKEAEKTAKESESESEDDGDETTHDHEP
KPNPKLEAGRKLPPSLEDVPQAYIARPLEDLDEFYHNQKTFVVVSKDKSIFXFSATNAMF
ILTPFNPIRRGAIYILVHPMFSVLIVITIVVNCVFMARTDSGPEYVENLFLGIYTLEAAT
KILARGLVLEPFTCLRDPWNWLDFFVISVAYLTMVVSTLGNLTALRTFRVLRALKTVAVI
PGLKTIVGALLEAVRRLRDVMILTVFVLSIFALVGMQLYSGTLRQKCILNWTDNIGPNVT
DEEWFSFVSDSANWEQDTFGNTLVCGNNSFAGQCSKFYVCIPDIGDNPNFGYTNFDNFGW
ALLCAFRLMTQDFWESLYHLVLRAEGSAHCMYFVFVILLGSFYLVNLILAIVAMSYGDTQ
KQDLADAEEEAAERQQEETRKEQLSLVTKSPSDASFNEEDECCSPDQPADKERLSMTSEQ
STASQRALKPSNKVRHSVSLPGSPYNLQRKGSKGSQFGWKKKQSNDRQPLVVPGNIEALP
LPFADDSAAVTPSSEDLCNSPFFLKNLPNGRRFSFAAMTGYRHPLAAGRPSSRRSSFGSQ
HSRGSRSSRHSVRSKIGGGGEKTKTEKLFFRKTNVPDVVLDTSKLADTNSISSIGSQALE
KRKKSGSNPFLNSSPTGANVEMKDVMVLKDIFEQATEHRRSLMSMASEPQLTTKDKLWRY
CCLWDCSPTFTKIQEYVNLFIMDAFVDLFITLCILVNTLFMALDKHNMNKDLENVSASAN
LFFTGIFAIEAVLKIIALSPSRYFKEGWNVFDSVIVFLSLTELVLTALPGLSVLRAFRLL
RVFKLAKSWPTLNMLISIVARTISAIGNLVIVLGIVVFIFAVMGQQLFGSNYIXFQERDL
FPENEGEMPRWNFSDFLHSFMIVFRVLCGEWIESMWDCLRVAGWPCIPFFLLTMIIGNLV
VLNLFLALLLSSFGAENLQVDNDDEPNKLAEAIDRFKRFGSWVKVKIIVCLKVRLRGVKS
KQQQLPLHVSSELNGKEALVDGVTGTGVEKTPEDMPDGVKISRTSSLRSQKKPLKSPTGS
EVSSSSSSLSSTHGTGKVNAEGEPEMNEVEVVYVKEPDDCLCKICMKRQCVQSLAQTKFG
RVWWSIRCFMFKVTEHKYFETFIIFMILCSSLALVSSRRTLCERPTLRLILEYLDKVFTY
IFICEMVIKWFAFGFKVYFTDAWCWLDFIIVSLSIFMMIMESLGFGNISSIKALRTLRAL
RPLRAVSRWEGMRVVVNALIKAIPSICNVLLVCLVFWLIFGIMGVQLFKGKFYSCKDGNG
TRLAVHIVNNYSQCIEQNYTWTNSKVNFDDVIQAYLALFQVATYKGWIDIMNNAIDAREI
NEQPDREVNVYSYLYFVLFIIFGSFFTLNLFIGVIIENFNAQKKKAGGSLELFMTEDQKK
YYNAMKRMKNKSPQKSIPRPKMKFAALIFDLTTNQKFDIVIMIIIMANMLTMTLEFYNMP
ETMKLALNNINIVFIAIFTLECVLKLIGLRLYYFKIPWNVFDFVVVVLSILASSLSEFED
SFFISPTLLRVIRVFRVGRVLRLVKSAKGIRTLLFSLAVSLPALFNIGLLLALVMFIYAI
MGMNFFITAPSYAGLDDAFNFKTFFRSMIVLFQMCTSAGWSDVMNGLIHNCVPDEYCPEY
NKATLYLASYLIISYLVVVNMYIAVILENFSQATEDVQQGLTPDDFDMYYEKWEKYDPKA
TKYIPLDQLSDFVDFLDEPLRLPKPNHFLLVKMEIPICEGDRCFCKDILDALTKNFLGTT
DTSMIPVKEEHTDENYKAISTTLKRQKEHYAARIIQKAYRNYKKRKEESDGEGDDGVEAV
GTGVEVVRAVEASDIAVVTTGQETMAAAATRRVGRQRAGGQRGVAR
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggcaatggagtggacgccgttccgcctgttcactcgcgagtcgctt
ttcaacatcgagcggcgcattgccgaggagcaggcggccaaggaggcggagaagaccgcc
aaggagtctgagtcagagtcggaggacgatggcgatgagacgacccacgaccacgagcct
aagcccaaccccaagctggaggcggggcggaagctacccccgtcgttagaggacgtcccc
caggcctacattgcgcggccattggaggatctggacgagttctaccacaaccagaagacc
ttcgtcgtggtgagcaaggacaaatccatattcnggttcagcgccaccaacgccatgttt
atactgacgcccttcaaccccatccggcgtggtgctatctacattctagtccatccgatg
tttagtgtcttgattgttatcaccattgtagtcaactgtgtcttcatggcgcgaacagac
tcgggtccagagtacgtagaaaacttattccttggaatctacactctggaggcggccaca
aagattttagcgagaggcctggttctagaaccattcacctgcttgagagacccttggaac
tggttggacttctttgtcatctctgtagcatacctaacaatggtggtctccactcttggt
aacctcacagctctacgaacatttagagtgcttcgtgccctgaagaccgtagcagttata
ccaggcctgaagactatcgtgggcgccttgttggaggccgtgcggcgtctgcgggacgtg
atgatcctgacggtcttcgtgttgtccatcttcgccctggtcggcatgcagctgtactcg
ggcacgctgcgccagaagtgcatcctcaactggaccgacaacatcggccccaacgtgacg
gatgaggagtggttctcgtttgtgagtgactcagccaactgggaacaggacacgtttggt
aacactcttgtctgcggcaataactcatttgccggccagtgctcaaaattctacgtatgc
attccggacatcggcgataaccccaactttggctacaccaacttcgacaacttcggctgg
gcgcttttgtgcgccttccgcctgatgacccaggacttctgggagagtttgtatcacttg
gtgttgagagccgaaggctcagcacattgcatgtatttcgtgtttgtcatccttctcggc
tcgttctacctggtgaacctgatcttggccattgtggccatgtcctacggcgatacgcag
aaacaggatcttgctgatgctgaagaggaagctgctgaaagacagcaagaagagacccgg
aaggaacagctgagcttggtaactaagagtccctcggacgcctccttcaacgaggaggat
gagtgctgcagtcctgaccagcctgccgacaaagaacgcctgtcaatgactagtgaacag
tccacagccagccagcgcgcgctgaagcctagcaacaaggtgagacattctgtaagcctc
ccaggctccccttacaacctgcagcgcaaaggtagcaaggggagtcagtttggttggaag
aagaaacaatccaacgatcgccagccactagtagtacctgggaacatcgaggcccttcct
ctcccctttgccgacgattcggcggctgtcaccccctcctccgaagatctatgcaattcg
cctttcttcctcaaaaatctccccaacggccgacggtttagctttgctgctatgactggc
tatcgccatccgctggctgccggacggccaagctcccgacggagtagcttcggctcccag
cacagccgcgggtcgcgatccagccgtcactcagtgcgctcgaagatcggcgggggtggg
gagaagaccaagacggagaaactgttcttcaggaagaccaatgtgccagacgtggttctg
gacacctccaagttagccgacaccaattcaatcagtagtattggcagccaggcactagag
aaacggaaaaagtctggaagcaatcctttcctaaattcctctcccacaggagcgaatgtt
gagatgaaagacgtcatggtcctaaaggacatctttgagcaagcgactgaacacagacga
agtctcatgagcatggcaagcgagcctcagctgacgacaaaggacaagttgtggcgctac
tgctgcctttgggactgctccccgaccttcaccaagatccaagaatacgtcaacctcttc
atcatggacgcctttgtggatctctttattaccctgtgtatcctggtcaacactttattc
atggccctcgacaaacataacatgaacaaagaccttgaaaacgtctccgcctctgccaac
ctgtttttcactggaatctttgcgatcgaggcggtcctgaagatcatcgctctgtcacct
tcccgctacttcaaggagggctggaacgtctttgacagcgttatcgtctttctttccctc
acagagctcgtcctcactgcccttccaggcctctccgtgcttcgggctttcagactgctg
agagttttcaagttagcaaagtcatggccgaccctcaacatgttaatctccatcgtggcg
cggaccatcagcgctatcggtaaccttgtcatcgtcctgggcatcgtcgtcttcatcttc
gctgtgatgggacagcagctgtttggcagcaactacattngatttcaagaacgagacttg
tttccggaaaatgaaggcgaaatgcctagatggaatttttcagacttcctgcactcattc
atgatcgtattccgtgttttgtgtggtgagtggattgagtcgatgtgggactgtctcagg
gttgcaggttggccctgtatccctttcttcctgctcaccatgattatcggcaacttagtg
gtactgaacctcttccttgccttgctgctgagctcctttggcgcagaaaaccttcaggtc
gacaacgacgacgagcccaacaagctggccgaagccatagaccgcttcaagcgcttcggc
agctgggtcaaggtcaaaatcatcgtctgcctcaaagtgcgcctgcgtggggtcaaatcc
aagcaacagcagctccctctgcacgtgtcgtcggaactcaacgggaaggaagctctggtg
gatggcgtgacgggaaccggcgttgagaaaactccagaggacatgccagacggagtcaag
atctcaaggacatctagcctgcgctcacaaaagaaacccctcaagagccccacgggttca
gaggtcagctcatcctcctcgtctctgtcatctactcacggaacaggcaaagtgaatgca
gagggagaaccggaaatgaacgaagtagaggtggtctacgtgaaggagcctgatgactgt
ctgtgcaagatttgcatgaagcggcagtgtgtacagtccctggctcagacgaagtttggt
cgcgtctggtggagcattcgatgcttcatgttcaaggtgacggagcacaagtactttgag
accttcatcatcttcatgatcttgtgcagcagtctcgctcttgtgagtagtcgacgaaca
ctgtgtgagcgaccaacgctgcgactcattctggaatacctggacaaagtgttcacctat
atcttcatctgtgagatggtcattaagtggtttgccttcggcttcaaggtatatttcact
gatgcctggtgctggctggactttatcattgtatcgctctccattttcatgatgatcatg
gaaagcctgggttttggtaacatttcttcaataaaggctctcagaacgctaagggcactg
cgacctctcagagcagtctccagatgggagggcatgcgggttgttgttaacgccctcatc
aaggccatcccctccatctgcaacgtgcttctcgtctgcctggtcttttggctcatcttt
ggaattatgggggtacagctgttcaagggcaagttctattcctgcaaggacggaaatgga
accaggctagcggtccacatcgtcaacaactattcgcaatgcattgagcagaactacact
tggactaacagcaaagtcaactttgacgatgtcatacaggcttacctagctctctttcaa
gtggcgacctataaggggtggatagacatcatgaacaacgccatcgatgcaagagagatc
aacgagcaaccagaccgtgaagtgaacgtctactcctatctctacttcgtcctttttatc
atctttggatccttctttacactcaatctcttcattggtgttattatcgaaaacttcaac
gcccaaaagaaaaaggctggaggctcccttgaactgtttatgactgaagaccagaaaaag
tactacaatgccatgaagcgtatgaaaaacaaatctcctcagaagtcgatacctaggccc
aagatgaaattcgcagcactaatattcgacttgacaaccaatcagaagttcgacatcgtt
atcatgattatcatcatggcaaacatgctgacaatgactctggagttctacaacatgccc
gaaacgatgaaattagcccttaacaacatcaacatcgtcttcatcgccatttttacactc
gagtgtgtcttgaagctcatcggactccgcctgtactatttcaagatcccgtggaatgtc
ttcgacttcgtggtggtggtgttgtctattcttgcttcatcgttatcagagtttgaggac
agcttcttcatctcccccactcttctgcgtgtgattcgagtctttcgcgttggccgagta
ctgagattggtcaagtctgctaagggcattcggactctgctgttctccttggccgtctcc
ttgcctgcgctcttcaacatcggcttgcttctggcgttggtaatgtttatctacgccatc
atgggcatgaacttcttcataaccgctccttcatacgcgggcctggacgacgccttcaac
ttcaaaactttctttcgaagcatgatcgtgcttttccagatgtgcacttccgctggctgg
agtgatgtcatgaatgggttgatccataattgcgtaccggacgaatattgcccggagtac
aacaaagccaccttgtacctggcttcctacctcatcatcagctacctggtggtcgtcaac
atgtacatagccgtcattctcgaaaacttctcgcaggcgacagaggatgtgcaacaaggc
ttgacaccggacgacttcgacatgtactacgagaagtgggagaagtacgaccccaaggcc
actaaatacatccccctcgaccagctctcagacttcgtggacttcctggatgagcccttg
cggctgcccaagcccaaccactttcttctggtcaagatggagatcccgatttgcgaggga
gacaggtgcttttgcaaggatatcctggatgcattgaccaagaacttcctgggcaccacc
gacaccagcatgattcctgtcaaagaagagcacactgatgaaaactataaagcaatcagc
acgacgctaaagcgccagaaggagcattatgccgctcgtatcattcagaaggcctacagg
aactacaagaaacggaaagaggagtcggacggcgagggtgatgacggagtagaggcagtg
gggacaggagtggaggtagtgcgggccgtggaggcatcagacatcgccgtcgtgacgacg
ggtcaggagacgatggcagcggcagcgacgagaagggtcggaagacaaagagcgggaggg
cagcggggtgtcgcgaggtag
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integrated database retrieval system
