Pomacea canaliculata (golden apple snail): 112573641
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Entry
112573641 CDS
T05881
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112573641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112573641
03036 Chromosome and associated proteins [BR:
pcan03036
]
112573641
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112573641
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112573641
Chromatin remodeling factors
BAF complex
112573641
PBAF complex
112573641
GBAF(ncBAF) complex
112573641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
ResIII
QLQ
HDA2-3
DEAD
BRK
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
112573641
NCBI-ProteinID:
XP_025109979
LinkDB
All DBs
Position
LG10:3964539..3987348
Genome browser
AA seq
1607 aa
AA seq
DB search
MGGPPNQAMTGPMQGMPGGPSSQGMGGMHGGMQGMPGSGTMGPGGMGIGQGMGPGAAGSM
PSNPAMGGPNITMQPGMGEAPSSLSSSACVGVGSTGIPVASSTGMSGTAGINSHNIAAGG
AGAAGTGGPGGMNPMQQGRPAMGGPTGQPAQMQGGMPSNPGMGRPAVGQMQPGVMGPPNQ
TVDAVQGSNQGMQGPGIGPGGMPQRQTAFSPVQLHQLRAQIMAYKLLSRTQPIPETLRLA
VEGKRHMGPYPRPGDPHQMQQMRMQQQQGAPQSQQQQMPPGAQPPVQQHMPSQMAPMRPH
SGPVGMNSQQGPQDMQQQQQQQRINVHSQQPQQINQQQPQQQQPPPSVQAMMAMQQKQNR
IAPVAKPQGLDPIAVLGERENRIAARISQRIKELTSMPATMADDMRTQAMIELRALRLLN
FQRQLRAEVIASMRRDTTLETALNTKAYKRSKRQSLREARITEKLEKQQKVEQERKKRQK
HQEYLNTVLQHAKDFREFHRNVQAKVVKLNKAVMTYHANTEREQKKEQERIEKERMRRLM
AEDEEGYRRLIDQKKDRRLAYLLTQTDEYVMSLMNLVKQHKEDVIRKQKAAKKKKKKKDT
PMPLREGDESSNSGEMQVKVVNVETGQVLSGEDAPLAVSWMRGVAPRDEDDDDYEEDYGS
DEDDDMENDPLEPPNSNKNIDDPDAVKEVLQHARVEDDDEYKTSHSGAQNYYTIAHTVHE
TVTEQATILVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEKK
KVNGPYLIIVPLSTLSNWMYEFDKWAPSVVKIAYKGSPAVRRALTPQLKTSRFNVLLTTY
EYIIKDKAALSKLRWKYMIIDEGHRMKNHHCKLTQILNTYYNAPNRLLLTGTPLQNKLPE
LWALLNFLLPSIFKSCSTFEQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPFLLRRL
KKEVESQLPEKVEYVIKCDMSALQRFIYNHMQSKGVLLTDGSEKDKKGKGGTKTLMNTIM
QLRKICNHPFMFQHIEEAFADHIGLSGGIVTGPELYRSSGKFELLDRILPKLKATNHKVL
VFCQMTSLMSIMEDYLVYRGIRYLRLDGMTKSEDRGQLLELFNKKDSPYFLFLLSTRAGG
LGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEEKIQAAARF
KLNVDEKVIQAGMFDNKSTNTERRQFLQNILLQEADEEEEEDEVPDDETINQMLAREEEE
FELFQKMDLERRRMEARDPNRKPRLMEEDELPSWLVKDVKEVEKLTVEDEEDKMFGRGSR
TRKEVDYSDSLTEKQWLRAIEDGNLDEIEELSKSQKRKKRKAEEQRDDTPKAKKKRGRPP
VGKPKPNHPRMTKMMKKLYELVVNYKDSDGRVLSSMFMQLPSRKELPEYYEIITRPLDFK
KIYNRIKSHRYRNLDDLEADVMELCQNAQSFNMEGSVIYEDSIVLQSVFTSAREKLEKEG
FAASSSDSETEEEESSIASTSKGGKGIRDYDDDDDEGREAKKTKPAKEISRKPTDKARKP
KRRSKTRPVISDDETEDSCRDQSDGEGPSSSRGSSRVSSPGGGGRKR
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctccaaaccaggcaatgacgggtccaatgcaaggcatgcctggtggccca
tctagccaaggcatgggtggaatgcatggtggcatgcagggtatgccaggaagtggtaca
atgggccctgggggcatgggcattggccagggaatgggccctggtgcagctggtagcatg
cccagcaaccctgccatgggtgggcctaatataaccatgcaaccaggcatgggagaggct
cccagcagtttgtcttctagtgcctgtgttggtgttggcagcactgggattcctgtggcc
agctcaacaggaatgtctgggactgctggaataaacagccacaatattgctgctggtggt
gccggtgcggcaggcactggaggcccaggaggaatgaaccctatgcaacaggggcgacct
gccatgggaggacccactggacaaccggcacagatgcaaggggggatgcccagcaatcca
gggatgggcaggccagctgtgggtcagatgcagcctggtgtaatgggtcctcccaaccag
acagtagatgctgtgcaaggcagtaaccaaggcatgcaaggtccaggcataggcccagga
ggtatgcctcagaggcagactgccttcagtccagtgcagctgcaccagttaagggctcag
atcatggcatataaacttctttcaagaacacagccaatcccagagacattgcgtctggct
gtggagggcaaaagacatatgggaccataccccagacccggggacccacaccagatgcag
caaatgagaatgcagcaacagcaaggagctccacagtcacagcagcagcaaatgcctcca
ggggcacaacctcctgtgcaacagcatatgccatctcagatggctcctatgcgcccacat
tctggtccggtggggatgaacagtcagcagggaccgcaggacatgcaacagcagcagcag
caacagagaataaatgttcactcccaacagccacaacagataaatcaacaacagccacag
caacagcaaccacccccttcagtccaagccatgatggcaatgcaacagaagcaaaaccgc
attgctcctgtggccaaaccacagggccttgaccctattgcagttcttggcgaacgtgaa
aacagaattgctgcacgcatatctcagcgtatcaaggaactgacaagcatgcctgctacc
atggctgacgacatgcgaacacaagcaatgatagaacttcgtgccctgcgactccttaac
ttccaaagacagcttcgtgctgaagtgattgccagcatgcgacgggatactactcttgaa
actgctctcaatacaaaagcctacaaacgtagcaaacgccagtcactgcgggaggcaagg
atcacagaaaaacttgagaagcagcagaaagtggagcaggaaagaaagaaacggcagaaa
catcaggaatatctaaacactgtgctccagcatgctaaagatttccgtgaattccaccgc
aatgttcaggccaaagtagtgaagttaaacaaggcagttatgacttaccatgctaacact
gaacgtgaacaaaagaaggaacaggagagaatcgaaaaagagcgtatgcgccgtctcatg
gctgaagatgaagaaggataccgtcgcctgattgatcaaaagaaggataggcgtctggcc
tacttgctaacgcagacagatgagtatgttatgagcctaatgaatttggtaaagcaacat
aaggaggatgtcatccgcaagcaaaaggctgctaagaagaagaaaaagaagaaggacaca
cccatgcctctcagggagggggatgagagttccaacagtggtgaaatgcaggtcaaggtg
gtaaatgtagagacagggcaggtgttgtcaggagaggatgcaccacttgcagtcagctgg
atgcgtggcgttgcacccagagatgaagatgacgatgattacgaagaagactatggaagt
gatgaagatgatgatatggagaatgaccctcttgagcctcctaattctaacaagaacatc
gatgatccagatgccgtgaaggaggttttgcaacatgctcgagtggaggatgatgatgag
tacaagacgtcacattcaggagcccaaaattattacaccattgctcatacagtccatgaa
actgtaactgaacaggccacaatcttggtcaacggcaagctcaaggaatatcagatcaag
ggattggagtggatggtttcactatacaacaacaatctcaatggcatcctagcagatgag
atgggcttgggcaaaactatccagacaattgccttaattacataccttatggagaagaaa
aaagtcaatggcccgtatcttatcattgtcccactgtctaccttgtccaactggatgtac
gaatttgacaaatgggccccatcagtggtaaaaattgcctacaagggttctccagcagtt
cgtagggctcttactccacagctaaaaacaagtcgattcaatgtgctgctaacaacatat
gagtacattataaaagataaagctgctctgtcaaagctgcgctggaagtatatgatcatt
gatgaaggtcatcgaatgaagaatcaccactgtaaactgacgcagattttgaacacgtac
tacaatgcccctaatcgtttgctgctaacaggaacaccactgcagaacaaacttccagag
ctttgggcacttcttaactttttgctgccatcaatcttcaaatcttgctcaacttttgag
cagtggtttaatgctccttttgctatgactggagaaaaggtggagcttaatcaagaagag
accttgcttattattcgtcgtcttcacaaagtgttacgtccattcctgttacgtcgctta
aagaaagaagtggaatctcaacttccagaaaaggttgagtacgtcattaaatgtgacatg
tcggcactgcagcgctttatctacaaccacatgcaatccaagggtgtccttttgacagat
gggtcagaaaaagacaagaagggcaagggtggcaccaaaaccttgatgaacactatcatg
cagctgcgcaagatctgcaaccatcccttcatgttccagcacattgaggaagcctttgct
gatcacattgggctgtcaggaggaatagtaacagggccggagctttaccgctcctctggc
aagtttgaattgctggatcgcattctgcccaagctaaaggcaaccaaccacaaagtattg
gtcttctgccagatgacctcccttatgtccatcatggaggactacttggtatacagaggc
atacgttacttgcgtcttgatggcatgaccaaatctgaagatcgtggccagttattggaa
ctctttaacaagaaagattccccatactttttgttcctgctgtcaacacgtgctggaggt
ttaggacttaatctgcaagctgctgatacagtcgttatttttgattcagattggaatcct
catcaggatttgcaagcccaggatcgagcacatcgtataggacaaaaaaatgaggtgcgt
gttttaaggttgatgactgtgaacagcgttgaagaaaagatccaagctgctgctcgattc
aagctcaatgtggatgaaaaagtcatccaagctggaatgtttgacaataagtccaccaac
actgaaaggcgtcagttcctgcagaacatccttctgcaagaggctgatgaagaagaggaa
gaagatgaagtccccgatgatgaaacaatcaaccaaatgttggctcgcgaagaagaagag
tttgaacttttccagaaaatggacctcgagcgtagacgaatggaggcacgtgatccaaat
cgcaaaccaaggctaatggaagaggatgagctgccatcttggcttgtcaaagatgtgaaa
gaagttgagaagctgactgtagaagatgaagaggacaagatgtttgggcgtggctcccgt
actcgtaaggaagtggactactcagattctttgacagagaagcagtggcttcgagctatt
gaggatggcaacttagatgagattgaagagctttcaaagtctcagaagcgcaaaaagcgc
aaggcagaagaacaaagagatgatacacccaaggccaagaaaaagaggggaaggcctcca
gtggggaaacccaagcccaaccatcctcgcatgaccaagatgatgaagaagctctatgaa
cttgttgtcaactataaggatagtgatggccgtgttttgagcagcatgttcatgcagcta
ccatctcgaaaagagttgcccgagtactacgagatcatcactcgaccacttgactttaaa
aagatttataatcgtatcaagtctcaccgctacagaaacctagatgatttggaagcagat
gtaatggagttatgccaaaatgctcagagcttcaatatggaaggatctgttatctatgaa
gattccatcgtgctgcagtcagtcttcactagtgcccgagagaagctggagaaggaagga
tttgctgcatcatcgtcggacagcgaaacagaggaagaagaaagcagcatagccagcacc
agcaaaggaggaaaggggatccgagactatgatgacgatgatgatgaaggtcgagaggcc
aaaaaaacaaagcctgccaaagaaatcagccgaaagccaacagacaaggcacggaaacca
aagcgcagatcaaaaaccagaccagtaatcagtgacgatgaaacagaagacagctgcagg
gaccagtctgatggcgaaggaccaagcagctctaggggctcttcaagagtatcctcccct
ggtggagggggcagaaaacgatga
DBGET
integrated database retrieval system
