Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_012560
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Entry
PCC21_012560 CDS
T02320
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_012560
Enzymes [BR:
pcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PCC21_012560
DNA repair and recombination proteins [BR:
pcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PCC21_012560
Prokaryotic type
PCC21_012560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFR02659
UniProt:
A0AA86DGG2
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All DBs
Position
1437162..1438628
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AA seq
488 aa
AA seq
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MTTHVVWLRNDLRVTDNLALYAACQDPNATVLAVFIATPAQWEKHDMAPRQAAFLLENLT
LVQQALAEKGIPLHYHESADFSASVDWLAQFCAQQQATDLFYNYQYEINERLRDKQVKDR
LADSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLESDTTCVPAPDARGEP
INNTVELAPFSYQQREVDGDDFPSGERAALQQLRRFCREQVQDYDQQRDFPALPGTSKLS
PHLALGIVSPRQCFNRLRAECPEMLERREGGAFTWFNELVWREFYRHLIVSWPQLCKHRP
FTAWTQWVKWRESPEDLAAWQQGKTGYPIVDAAMRQLNETGWMHNRLRMICASFLVKDLL
IDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPEGRFIR
HWLPELAAVPDKDIHQPHRWADKYHHQLNYPLPIVDHKTARQNTLAAFEAAKNIGMADND
REEKSKYA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatgtagtctggctacgcaacgacctgcgcgttaccgataatctggcgctg
tacgcggcctgccaggatccgaatgctaccgtgctggcggtttttatcgccacgccggcg
cagtgggaaaagcacgatatggcaccgcgtcaggccgcctttctgctggagaacctgacg
ctggtgcagcaggcgctggccgagaaaggcatcccgctgcattaccacgaatctgctgat
ttttcggcatcggttgactggctggcacagttttgtgcgcagcagcaggccaccgatctt
ttctacaattaccagtatgaaatcaacgagcggctgcgtgacaagcaggtgaaagatcgg
ctggccgatagcgtagtttgtcacggttatcatgacagcctgttgttaccgccgggtagc
gtgctgacgggtaatggcgagatgtacaaagtgtttacgccctttcgtcaggcctttatc
aaacgtctgcttgagtcggatacgacgtgcgtaccggcaccggacgcgcgcggtgagccg
atcaataacacagtggaactggcaccgttcagctaccagcagcgtgaggtggatggcgac
gatttccccagtggggaacgtgcggcgttgcagcaactgcgccgtttttgccgtgagcag
gtgcaggattatgaccagcagcgggattttcctgcgttgcccggcaccagcaaactttct
ccgcatctggcgcttgggatcgtatcgccgcgccagtgctttaaccgtctgcgtgccgaa
tgcccggagatgttggaacggcgtgagggtggggcatttacctggtttaacgagctggtc
tggcgtgaattttaccgccacctgattgtgtcttggccgcagctatgtaaacaccgaccg
ttcaccgcatggacgcagtgggtgaaatggcgagaatcgccggaggatttagccgcctgg
cagcagggaaaaacgggctacccgattgtggatgcagcgatgcgtcaactgaatgaaacg
ggatggatgcacaatcgcctgcgtatgatttgcgccagttttctcgtcaaagatttactg
atcgattggcgggaaggcgaacgctactttatgtcgcaactgctggatggcgatctggcg
gcgaataacggcggctggcagtgggcagcgtcgacaggcaccgatgcggcaccttatttt
cgtatttttaacccgacaacgcagggcgagcgcttcgaccctgaaggtcggtttattcgt
cactggctgcccgaactggccgccgtgccggataaagatattcatcagccccatcgctgg
gctgacaaataccaccatcagctgaactatccgctgcccatcgtcgaccataaaaccgcg
cgtcagaatacgctggcggcgtttgaggcggccaaaaatatcggtatggcggataacgat
cgagaagagaaaagtaagtatgcgtaa
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