KEGG   Mixta calida: C2E16_03635
Entry
C2E16_03635       CDS       T05419                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pcd  Mixta calida
Pathway
pcd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C2E16_03635
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcd02044]
    C2E16_03635
Secretion system [BR:pcd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C2E16_03635
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AUY24092
LinkDB
Position
764638..765120
AA seq 160 aa
MAIDMFLKVDGVTGESQDSNHKGWTDITSFSWGASQPGNMSVGGGGGAGKVNFNDLHVDA
LVDKSTTAILKHCASGKHLNKVELSVCKAGGQQVEYTKITLEDVLVTSVQYTGTDNGDTV
GVSYAFQASRVKQQYWEQTASGGKGAESSAGWNIKENKEM
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctattgatatgttcctgaaggttgacggtgttaccggcgagtctcaggactccaac
cacaaaggctggactgacatcacttctttctcctggggcgcatcccagccgggcaacatg
tccgttggcggcggcggcggcgcgggtaaagtaaactttaacgacctgcatgttgatgcg
ctggtcgacaagtctactactgccattctgaagcactgcgccagcggtaagcacctgaat
aaagtcgagctttccgtatgcaaagcaggcggccagcaggttgaatataccaaaatcact
ctggaagatgtgctggtaacgtctgtgcaatataccggtacagataatggagatactgtc
ggcgtgagctatgcattccaggcgtctcgtgtgaaacagcagtattgggagcagaccgct
tccggcggtaagggtgctgaaagcagcgctggctggaacatcaaagaaaataaagaaatg
taa

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