Mixta calida: C2E16_19070
Help
Entry
C2E16_19070 CDS
T05419
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pcd
Mixta calida
Pathway
pcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2E16_19070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_19070
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2E16_19070
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2E16_19070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
NACHT
Viral_helicase1
AAA_23
nSTAND3
cobW
ScfRs
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AUY26791
LinkDB
All DBs
Position
4007700..4010531
Genome browser
AA seq
943 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLAQPEGARLMLLAPVVKDRKGEHTKTLENLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAIVADMDDA
NAEELLFSANFACPICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVVQNAEL
SLAGGAIRGWDRRNFYYFQMLRSLADHLKFDIEAPFNSLSEKVRQVILYGSGKESIEFKY
INDRGDTSVRRHPFEGVLHNMERRYKETESSAVREDLAKFISNRACATCEGTRLRREARH
VYVENTTLPTISDMSIGHAMDFFRNLKLSGQRAKIAEKVLKEIGDRLSFLVNVGLNYLSM
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLDTLIHLRDLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVVAEGTADEIMQVEESLTGQYLSGKRKIEV
PEQRVPADPNKVLKITGARGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATIAEAAPYRDVSGMEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE
SRSRGYNPGRFSFNVRGGRCEACQGDGVLRVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQLLLTVLHQLRDQGNTIVVIEHNLDVVKTADW
IVDLGPEGGSGGGQILVAGTPETVAKCKESHTARFLKPLLEQR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaagtccggggtgcccgcacccacaacctgaaaaacatcaacctgatc
atccctcgcgacaaactgatcgttgtcaccggcctgtcaggttccggtaagtcctcgctg
gcgttcgatacgctctacgccgagggacaacgccgctatgtggaatccctttccgcctat
gcgcgtcagtttctttcgctgatggaaaaaccggatgtcgatcatatcgaagggctatcg
cctgcgatttcgatcgagcagaaatcaacgtcccataacccgcgttcaacggtcgggacc
attactgaaattcatgactatctgcgtctgctgttcgcccgcgtgggcgagccgcgctgt
cccgatcatgacgtgccgctggcggcgcaaaccgtgagccaaatggtcgacaacgtgctg
gcgcagccggaaggcgcgcgcctgatgctgctggcgccggtggtgaaagatcgcaaaggc
gaacacaccaagacgctggagaacctggcgacgcagggctatatccgcgcccgcatcgac
ggcgaagtgtgcgatctttccgatccgccgaagctggagctgcaaaagaaacacaccatc
gaagtggttatcgatcgctttaaggtgcgcgaggatctggcgacgcgtctggcggaatcg
ttcgagaccgcgctggagctttccggcggcacggcgatcgtggcggatatggatgatgcc
aatgcggaagaactgctgttctccgccaacttcgcctgtccgatctgcggttacagcatg
agcgagctggagccgcgcctcttctcgttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgcagcaatattttgatcctgagcgcgtggtgcagaacgccgagctg
tcgctggcgggcggcgcgattcgcggctgggatcgtcgcaacttctactatttccagatg
ctgcgctcgctggcggatcatctgaaattcgatatcgaagcgccgttcaacagcctgagc
gaaaaagtgcgccaggtgatcctgtatggatccggcaaagagagcatcgaatttaaatat
atcaacgatcgcggcgacacctcggtgcgtcgacatccgtttgagggcgtgctgcacaat
atggagcgccgctataaagagacggaatcgagcgcggtgcgcgaagatctggcgaagttc
atcagcaaccgcgcctgcgctacctgcgaagggacgcgcctgcgccgcgaagcgcgtcac
gtttatgtggaaaacaccacgctgccgaccatctctgatatgagcatcggtcacgcgatg
gactttttccgcaacctgaagctgagcggccagcgcgccaaaatcgccgagaaagtgctg
aaagagatcggcgatcgcctgagcttcctggtcaacgtcggtttgaactacctttccatg
tcgcgttcggcggaaacgctctccggcggcgaggcgcagcgcatccgtctggcgagccag
atcggggccggtctggtaggcgtgatgtacgtgctggatgagccctctatcggcctgcac
cagcgcgataacgagcgcctgctcgatacgctgattcacctgcgcgacctgggcaacacg
gtgatcgtggtggaacatgacgaggatgcgattcgcgccgccgatcatattatcgatatc
ggccctggcgcgggcgtgcacggcggtcaggtcgtggcggaaggcaccgccgacgagatt
atgcaggtagaggaatcgctgaccggccagtacctgagcggcaagcgaaaaatcgaagtg
ccggaacagcgcgtgcccgccgatccgaacaaggtgctgaagattaccggcgcgcgcggc
aacaacctgaaggatgtgacgctgacgctgccggtcggcctgtttacctgcgtgaccggc
gtctccggctccggtaaatcgaccctgatcaacgacacgctgttcccgatcgcgcagcgc
cagctgaacggcgcgaccatcgcggaagcagcgccttaccgcgacgtcagcggcatggag
catttcgataaagttatcgatatcgatcagagcccgattggtcgtacgccgcgctccaac
ccggcgacctacacgggcattttcacgccgatccgcgaactgttcgccggcgtgccggaa
tcccgttcgcgcggctataacccaggccgcttcagctttaacgtgcgcggcggacgctgc
gaagcctgtcagggcgacggcgtgctgcgcgtggagatgcacttcctgccggatatctat
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgcttgagattaaatac
aaaggcaagagcatccacgaagtgctggatatgaccatcgaagaggcgcgcgagttcttc
gacgcggtgccagcgctggcgcgtaagctccagacgctgatggacgtggggctttcctat
attcgtctgggtcagtccgccactacgctgtccggcggcgaggcgcagcgcgtgaagctg
gcgcgcgagctgtcgaagcgcggcaccggtcagacgctctatatccttgatgaaccgacc
accggtttgcacttcgcggatatccagctgctgctgacggtgctccatcagctgcgcgat
cagggcaataccatcgtggtgattgagcataacctcgacgtggtgaaaactgccgactgg
attgtcgatctggggccggaaggcggcagcggcggcggtcagattctggtggcaggcacg
ccggaaaccgtggcgaagtgcaaagagtcgcataccgcgcgtttcctgaagccgctgctg
gaacaacgctaa
DBGET
integrated database retrieval system
