KEGG   Pantoea calida: C2E16_19400Help
Entry
C2E16_19400       CDS       T05419                                 

Gene name
tuf
Definition
(GenBank) elongation factor Tu
  KO
K02358  elongation factor Tu
Organism
pcd  Pantoea calida
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:pcd03012]
    C2E16_19400 (tuf)
   03029 Mitochondrial biogenesis [BR:pcd03029]
    C2E16_19400 (tuf)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcd04147]
    C2E16_19400 (tuf)
Translation factors [BR:pcd03012]
 Eukaryotic Type
  Elongation factors
   C2E16_19400 (tuf)
 Prokaryotic Type
   C2E16_19400 (tuf)
Mitochondrial biogenesis [BR:pcd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    C2E16_19400 (tuf)
Exosome [BR:pcd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C2E16_19400 (tuf)
  Exosomal proteins of breast cancer cells
   C2E16_19400 (tuf)
  Exosomal proteins of colorectal cancer cells
   C2E16_19400 (tuf)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 cobW Lsm_C
Motif
Other DBs
NCBI-ProteinID: AUY26848
LinkDB All DBs
Position
complement(4086888..4088072)
Genome map
AA seq 394 aa AA seqDB search
MSKEKFERSKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARG
ITINTSHVEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI
LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLSQYDFPGDDTPIVRGSALKALE
GDAEWEAKIIELAGHLDTYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG
EEVEIVGIKDTAKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGSIK
PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV
VTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG
NT seq 1185 nt NT seq  +upstreamnt  +downstreamnt
atgtctaaagaaaaatttgaacgttcaaaaccgcacgtcaacgtcggtactatcggccac
gttgaccacggtaaaactaccctgactgcagctatcaccaccgttctggctaagacctac
ggcggcgcagctcgcgcattcgatcagatcgataacgcgccggaagagaaggcacgtggt
atcaccatcaacacctctcacgttgaatatgacaccccgtctcgccactacgcgcacgtt
gactgcccgggccacgccgactacgtgaaaaacatgatcaccggtgctgctcagatggac
ggcgctatcctggttgttgctgcgactgacggcccgatgccgcagacccgtgagcacatc
ctgctgggtcgtcaggttggcgttccgtacatcatcgtgttcctgaacaagtgtgacatg
gttgatgacgaagagctgctggaactggttgagatggaagtgcgtgacctgctgtctcag
tacgacttcccgggcgacgacactccgatcgttcgcggttccgcgctgaaagcgctggaa
ggcgacgctgagtgggaagcgaaaatcatcgagctggctggccacctggatacctacatc
ccggaaccagagcgcgcgattgacaagccgttcctgctgccgatcgaagacgtattctcc
atctctggtcgtggtaccgtagtgaccggtcgtgttgagcgcggcatcatcaaagtgggt
gaagaagttgaaatcgtgggtatcaaagataccgcgaaatctacctgtaccggcgttgaa
atgttccgcaaactgctggacgaaggccgtgctggtgagaacgtcggcgttctgctgcgt
ggcatcaagcgtgaagagatcgagcgtggccaggttctggctaagccgggctctatcaag
ccgcacaccaaattcgaatcagaagtatacatcctgtccaaagacgaaggcggccgtcac
actccgttcttcaaaggctatcgtcctcagttctacttccgtacgactgacgtaacgggc
accatcgaactgccggaaggcgttgagatggttatgccgggcgacaacatcaaaatggtt
gttaccctgatccacccgatcgcgatggacgacggtctgcgtttcgcaatccgcgaaggc
ggccgtaccgttggtgcaggcgttgttgctaaagttctgggctaa

DBGET integrated database retrieval system