Mixta calida: C2E16_19660
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Entry
C2E16_19660 CDS
T05419
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcd
Mixta calida
Pathway
pcd00300
Lysine biosynthesis
pcd00470
D-Amino acid metabolism
pcd01100
Metabolic pathways
pcd01110
Biosynthesis of secondary metabolites
pcd01120
Microbial metabolism in diverse environments
pcd01230
Biosynthesis of amino acids
Module
pcd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C2E16_19660
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C2E16_19660
Enzymes [BR:
pcd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C2E16_19660
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AUY27240
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Position
complement(4140995..4141819)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIRVSTQTGRMVLSVTNDELVRVNMGE
PNFEPQQVPFRANKAESLYLLRVAEQTIMFGVVSMGNPHCVIQVANVKTAAVETLGPVLE
SHERFPERVNVGFMEVVNSDHIRLRVYERGAGETQACGSGACAAVACGIQQGLLAEKVRV
DLPGGTLHIAWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcacggtcttggcaatgactttatggtcgttgacgccgtcacg
caaaatgtctatttctcgccggagttgatccgtcgcctggcggatcgtcatctgggcatc
ggcttcgatcagctgttgatcgtcgagccgccttacgatcccgatctcgatttccattac
cgcatctttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcacgctgtttc
gcccgctttgtccgtctgaagggattgacgaacaaaagcgatatccgcgtcagcacccag
acggggcgcatggtactcagcgtcaccaacgatgagctggtgcgcgtcaacatgggcgag
ccaaatttcgaaccgcagcaggtgccgtttcgcgccaacaaggcggaaagcctttatctg
ctgcgcgtcgccgagcaaaccatcatgttcggcgtggtctccatgggcaatccgcattgc
gtgattcaggtcgccaacgtaaaaaccgcggcggtcgaaacgctgggcccggtgctggaa
agccatgaacgtttcccggagcgggttaacgtcggttttatggaagtggtgaattcggat
catatccgtctgcgcgtttatgaacgcggcgcaggcgaaacgcaggcctgcggcagcgga
gcgtgcgctgcggtggcctgcggcattcagcaagggctgttggcggaaaaagtgcgcgtc
gatctgccgggcggtacgctgcatatcgcatggaaagggccgggacatccgctctatatg
accggaccggccacgcacgtttatgatgggtttattcatttatga
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