Mixta calida: C2E16_20200
Help
Entry
C2E16_20200 CDS
T05419
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
pcd
Mixta calida
Pathway
pcd00540
Lipopolysaccharide biosynthesis
pcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2E16_20200
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
C2E16_20200
Enzymes [BR:
pcd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
C2E16_20200
Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
Core region
C2E16_20200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AUY26976
LinkDB
All DBs
Position
4250786..4251835
Genome browser
AA seq
349 aa
AA seq
DB search
MKILVIGPSWVGDMMMSQSLYRTLKAEHPDAVIDVMAPAWCRPLLSRMPEVNEALAMPLG
HGALALGERYRLGKALRQKNYQRAWVLPGSFKSALVPFFAGIPLRTGWRGEMRYGLLNDL
RVLDKPAFPLMVERYVALAYDKTRIRSARDLPQPLLWPRLQVEEQEKIDTAAQFALTADR
PLIGFCPGAEFGPAKRWPHYHYATLAQQLIAAGYQVVLFGSAKDHATGEEIRQTLSETDR
LHCRNLAGETQLEQAVILLAHCDAVVTNDSGLMHIAAALDRPLVALYGPSSPDFTPPLSQ
RARVIRLITGYHKVRKGDAEQGYHQSLIDIQPTRVMEELHALLGQREHI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactggtaatcggcccttcctgggtcggcgatatgatgatgtcgcaaagtctc
tatcgcacgctgaaggccgagcatcctgatgccgtgattgatgtgatggcaccagcctgg
tgccgccctctgttgtcgcgcatgccggaagtcaacgaagcgctggcgatgccgctggga
cacggcgcgctggcattgggcgaacgttatcgcctgggaaaagcgctgcgtcagaaaaac
tatcagcgggcctgggtgttgcccggctcgtttaaatcggcgctggtacccttctttgcc
ggcattccactgcgtaccggctggcgcggcgagatgcgctacggcctgctgaacgatctg
cgcgtgctggataaacccgcttttcccctgatggtcgagcgctatgtggcgctggcatac
gacaaaacgcgcatccgcagcgcgcgcgatctgccgcaacccttactgtggccacgtttg
caggttgaggaacaggaaaaaatcgataccgctgcgcagttcgcgctgaccgccgaccga
ccgcttatcggcttctgtcccggtgcggagttcggcccggccaagcgctggccgcactat
cactatgcgacgctggcgcagcagttgatcgcggcgggttatcaggtggtgctgtttggc
tccgctaaagatcatgctaccggcgaagaaattcgccagacgctgagcgagacggaccgc
ctccactgccgcaatctggcgggcgaaacccaactggaacaggcggtgattctgttagcg
cactgcgacgcggtagtcaccaacgattccggcctgatgcatatcgctgccgcgctcgat
cggccgctggtcgcgctttacggccccagcagtcctgacttcaccccgccgctgtcacag
cgtgcgcgcgttattcgcctgattaccggctaccataaagtgcgtaaaggggatgcggag
cagggttatcatcaaagcctgatcgatattcagccaacgcgcgtaatggaagaactgcac
gccctgctgggccagcgggagcatatatga
DBGET
integrated database retrieval system
