Pediococcus claussenii: PECL_1099
Help
Entry
PECL_1099 CDS
T01713
Symbol
topB
Name
(GenBank) DNA topoisomerase III family protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pce
Pediococcus claussenii
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pce03032
]
PECL_1099 (topB)
Enzymes [BR:
pce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PECL_1099 (topB)
DNA replication proteins [BR:
pce03032
]
Prokaryotic type
DNA Topoisomerases
PECL_1099 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-TFIIB
zinc-ribbons_6
zf-C4_Topoisom
OrfB_Zn_ribbon
Zn_Tnp_IS1595
HTH_45
NRDD
Toprim_4
LysW-like_globular
DZR
TF_Zn_Ribbon
RNA_POL_M_15KD
Motif
Other DBs
NCBI-ProteinID:
AEV95362
UniProt:
G8PDM7
LinkDB
All DBs
Position
complement(1093830..1095902)
Genome browser
AA seq
690 aa
AA seq
DB search
MKKKLIITEKPSVATDLARVLGVEQKNKTYYEGNNYIITWAYGHLLTLKLPEDINKDWQN
WDLNDLPIIPKNIGIKPLPKTKQQLKAISRLAKRTDVESAIIATDSGREGEAVARYILEW
IRFNKPVERLWISSQTTKAIREGFSNLRPAEQFDDLYASALARGKADWLVGLNVTRALTT
KYKDNLSAGRVQTPTLSFIWKQEQEINSFRPHKFYKIYLVYQGQTADLLLKNSEQFETRE
QAEKVVQGLQKKSGLVEDLKVKQNMQDAPLPYDLTELQRTANSMYAFSAKKTLSIVQSLY
EVHKIVSYPRTDSKYLSTDIKDTLKERLSALSGFDSQAKAYLRRGAKIVQRSVFNDQKVT
DHYALIPTEESVQPAKLSSDELRIFRLIEKRFLGLFAEKFITETTNTTIGFGSAKFVFKQ
TRVVKPGWRFDLETETKKTKVQLKLKQQIEGQFIIKEKLTTPPKPLTEGTLLGKMEKFGL
GTPATRAEIIEKLTQSELVKRTNGALITTPKGQQLLKLVNKSLASPDLTSKWEKSLESIA
HGKVNYMDFVKDVEKETRRLVSEIKTSEIEYRDFGVTNKLCPECGYALKERNSRDGKILT
CSHCGYRRRKDPKVSNHRCPQCHKKMVILEKNGQSYFRCLNDGTTEKMLDKKERKKKISK
KEERKLLSKINNEDPEESPLAIAMKKAMEK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaactaattattactgaaaaacccagtgtagcaactgatttagcaagagtt
ttgggagttgaacagaaaaataaaacgtactatgagggaaataactacataattacgtgg
gcttatggtcatctcctaactttaaaactacccgaagatattaataaagattggcaaaat
tgggatttaaacgatcttccaattatccccaaaaatattggaattaaaccgttaccgaaa
acaaagcaacaattaaaggcaattagccgtttagctaaaagaactgacgttgaaagtgca
attattgccactgattctggacgcgagggagaagctgttgcacgttatattttggaatgg
atacgttttaataaaccagttgaacgattatggatctcctcacaaacaactaaggcaatt
cgtgagggcttttcaaatttaaggcctgctgaacaatttgacgatttgtatgcttctgct
ttagcgcgtggaaaagcagattggctggtaggattgaatgtaaccagagccttaactaca
aaatataaagataatctttctgccgggcgtgtacaaacgccaactctttcctttatatgg
aagcaggaacaagaaataaattcttttagaccacataaattttataaaatttatttagta
tatcaagggcagacggcggatttgctattgaaaaattccgaacagtttgaaacacgggaa
caggcagaaaaagtagtacaggggttgcaaaaaaagagcgggctagttgaggatttaaaa
gtaaaacaaaatatgcaggatgcacctttaccatatgatttaaccgagttacaaagaacg
gcaaatagtatgtatgcattttctgcaaagaagactttgtcgattgttcagtccctttat
gaagtgcataagattgttagttatcctcgaactgattctaagtatttatcaacagatatt
aaggatactctaaaagaacgtttgtctgcccttagtggctttgattcacaagcaaaagca
tatcttagacggggagcgaaaattgttcagaggtctgtttttaatgatcaaaaagttaca
gatcattacgcacttattccgaccgaagaatcagttcaaccagcaaagttatcgtcagat
gaacttcgaattttccgtttaattgaaaaaagatttttgggcttatttgcggaaaaattt
ataactgaaacaaccaatacaacgattggctttggatctgcaaaatttgtttttaaacaa
actagagttgttaaaccgggatggcggtttgacttggaaaccgaaactaaaaaaacgaag
gttcaattaaagcttaagcaacaaattgagggccagtttataattaaagaaaagttaaca
acacctcctaagccattaacagagggaacattacttggaaaaatggaaaaatttgggttg
gggacgcctgcaactcgtgccgaaattatagaaaagcttacccaaagtgaattagtgaaa
cgaacgaatggagcgctaataaccacccctaagggacaacaacttttaaaacttgttaat
aaaagtttggcttcgcccgatttaacaagtaagtgggagaagtctctggaatcgattgcc
catggaaaagtaaattatatggattttgttaaagatgttgaaaaagaaactagaagatta
gtgagtgaaataaaaactagtgagattgagtaccgagattttggggtgacaaataaatta
tgtccagaatgtggatatgcactaaaagaacgaaattcacgagatgggaaaatattgacc
tgttcacattgtggctatcgcagacgtaaagatcccaaggtatcgaatcatcgttgccca
caatgtcataaaaagatggtaattcttgaaaaaaatggtcagagttattttcgctgtctg
aatgatggaaccactgagaaaatgttggataaaaaagaacgtaagaaaaaaatctcgaaa
aaagaagagcgaaaattactaagcaaaattaataatgaagatccggaagaaagtccacta
gcaattgcgatgaaaaaagcaatggaaaaataa
DBGET
integrated database retrieval system
