KEGG   Polistes canadensis: 106790039Help
Entry
106790039         CDS       T05611                                 

Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
pcf  Polistes canadensis
Brite
KEGG Orthology (KO) [BR:pcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcf01009]
    106790039
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcf03019]
    106790039
   04131 Membrane trafficking [BR:pcf04131]
    106790039
   03036 Chromosome and associated proteins [BR:pcf03036]
    106790039
Enzymes [BR:pcf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106790039
Protein phosphatases and associated proteins [BR:pcf01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106790039
Messenger RNA biogenesis [BR:pcf03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     106790039
Membrane trafficking [BR:pcf04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    106790039
Chromosome and associated proteins [BR:pcf03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     106790039
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 106790039
NCBI-ProteinID: XP_014610165
LinkDB All DBs
Position
Unknown
AA seq 1157 aa AA seqDB search
MSQTGLEGNFFDAVRQLAESEIELIKVIEESTMNRQKNTTDMKSSTKKKNIKKSPKLSNV
KTQPSAALLAAKQEAAQRKILQNKKSNTNFVYDIYQKIRDAYAVVRKETGIVYDRSMEDH
KCLWDENYPECPERLTRTLERCDELGLLNRCKLIQPRFCTENDILQMHTQKQIDILKETS
GSMDLDKLETLSSKYDAIYVNPSTFKLSLLAVGSTINLIESICKGDIQNGMAIIRPPGHH
AMKSEYCGYCFYNNVAIAAKKALNDNLANKILIVDWDVHHGQATQQMFYDDSRVVYFSIH
RYENGTFWPNLEESDFHYIGEGLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQP
DLIIVSAGYDAALGCPEGEMEITPACYAHLLSSLLSLAGGKIAIILEGGYCLKSLAESAA
LTLRTLLGDPCPMLQTLQSPSLSVRDTILNSIYAHKQYWKCYQYQEQYSINNRIVRKEGN
NDQHLPIVNYTGEVYKPDFYDTRNCYPIQNKDIFEALDKRLDSLIKSTNLFKAPNKVCIV
YDNRMLKHCDAVNNTHPEKPNRIVSIYKKHEEHGLLERCYLQQGRVATEEELLLAHSQDY
INAIKKTETFKSKELERQASKYNSVYLHNETWFSACVSAGSLLQIVDNVLNGEAQSGVAV
IRPPGHHAEPNSACGFCIFNNIAIAAKYALNIHNIKRILIVDWDVHHGNGTQFIFENDPS
VLYTSIHRYDNGNFFPHSKQGNYTSVGLGSGEGYCVNIPWNKKGMGNAEYIAAFQQVVMP
IAYQFNPELVLVSAGFDACIGDPLGGCTVTPEMYGHLTHWLSSLANGRVILSLEGGYNIN
SISHSMAICTKALLGDPLPLLDASLIPCSSAIHSINNVLKVQKKYWSSLMFNLSLPKENL
KKIATNIKMNDQIKNFQFNQHSESKIALEGIESEKLDIKHAFNKYSMNKISGEEILKLQN
EIKNIKIRDSKIAKEEKTIEIARACVNKDQRKEGDRKETAGSSNNPGNSNDSGENRGALD
EAAATNLTDFLSDNWQALTDRKMFAVIPLKECPHLNTVNNVPPCGIDIHLPCIECNSKTE
NWICLQCYTVHCARNINQHALLHSDETLHPLTLSFSDLSVWCYGCSAYIDNPRLYAARNA
AHLSKFNQEAPWIYGVQ
NT seq 3474 nt NT seq  +upstreamnt  +downstreamnt
atgtcgcaaaccggactagaagggaatttttttgatgctgtgcggcaactggcagagagt
gaaattgaacttatcaaagttatcgaggaatctactatgaatcgtcaaaagaatactaca
gatatgaaatcgtcaactaaaaaaaagaatatcaagaaatcacctaaactctctaatgta
aagactcaaccatctgccgctttattggcagctaaacaagaggcagcgcaacgcaaaata
ttacaaaataaaaaatcaaatactaattttgtatatgacatttatcaaaaaataagagat
gcatacgctgttgtgcgtaaagaaactggtattgtttatgatcgttctatggaggatcat
aaatgtttgtgggatgaaaattatccagaatgtccagaaagattaacaaggaccttagaa
agatgtgatgagttaggattattaaacaggtgcaaattaattcaaccaagattttgtaca
gaaaatgatatacttcaaatgcatacccaaaaacaaatagacattttaaaagagaccagt
ggatctatggatttggataaattagaaacactatcttctaaatacgatgctatatatgtt
aatccatccacttttaaattatctttactggctgtcggctcaacgataaatttgatagaa
agtatttgtaagggtgatatacaaaacggcatggctattatcagaccacctgggcatcac
gcgatgaaatctgaatattgtggatattgtttctataataatgtggctatcgcagcaaaa
aaagctttaaatgataatttagctaacaaaattcttatcgttgattgggacgtacatcat
ggacaagcaactcaacaaatgttttacgatgattcacgtgtagtttatttttcaatacat
cgttatgaaaatggaacattctggcctaatttagaagaatctgattttcattacatcggc
gaaggcttgggagaaggttacaattttaatataccacttaacaaaactggcatgacaaat
gctgattatattgcaatatttcaacaagttttgttaccaatggcttacgagtttcaacca
gatctcataatagtatcagctggttatgatgcagcattgggatgcccagagggtgaaatg
gagataacacctgcatgttacgctcatctattgtcgtccctattgagtttagcagggggg
aagatagcgattatattggagggtggttattgtctaaagtcattggctgaaagcgctgca
ttaactctgcgaacattactaggcgatccatgtcctatgttgcaaacattgcaatcaccg
tcattaagtgtacgtgacacaattttaaatagcatctatgcccacaaacaatattggaag
tgttatcaatatcaagaacaatatagtattaataacagaattgtcagaaaagaaggaaat
aatgatcaacatttgcccattgttaattacaccggagaagtgtataaaccagatttttac
gacacacggaattgttatcctattcaaaataaagacatttttgaagcattagataagaga
ttagattcattgataaaatctacaaatttattcaaagcacctaacaaagtatgcattgta
tatgacaacagaatgttgaaacattgcgatgccgttaataacacgcatcctgaaaaacct
aatcgaatcgtaagcatttataagaaacacgaagagcatggtttattagaacggtgctat
ttacaacaaggaagagtggctacagaagaagaactactattagctcattcgcaagattat
attaatgcgataaaaaagacggaaacatttaaatctaaagaattggaaagacaagcatcc
aaatataattctgtttatttgcataacgaaacatggttttctgcttgcgtatctgctggt
tcattacttcaaattgtggacaatgtattaaatggagaagcgcaatctggagtcgcggta
ataagacctccaggacatcacgcggaaccaaattcagcttgtggtttttgtatttttaat
aatattgcaatagcagcaaaatatgctttaaatattcataatataaagaggatattaata
gtagattgggatgtacatcatggaaatggtactcaatttatttttgaaaatgatccaagc
gtgctgtatacatctatccatcgttatgacaatggaaatttttttccacattctaagcaa
ggcaattacacatctgttggattaggatcaggagaaggttattgcgtaaatataccatgg
aataaaaaaggaatgggaaatgcagaatatatagctgcatttcaacaagttgtgatgccg
attgcttatcaatttaatccagaattagttctagtttctgcaggctttgatgcttgtatc
ggagatccgttagggggatgtacagtaacaccagaaatgtatggacatttaacgcattgg
ttatcttcattggcgaatggacgtgttattcttagcttagagggcggttacaatataaat
tccatttctcattcaatggcaatatgtacaaaagcattactcggtgatccattacccttg
ctagacgcttcgttaataccgtgttcaagtgcaatacattctataaataacgtactcaaa
gtgcagaagaaatattggtcgagtttaatgttcaatttatcgttgcctaaagaaaatctc
aaaaaaattgctactaatattaagatgaacgatcaaattaaaaattttcaattcaatcaa
cattcggagtcgaaaattgccttggagggtatagaaagtgaaaaattggatatcaagcat
gcgtttaataaatatagtatgaataaaatatcgggcgaagaaatattgaaacttcaaaat
gagataaaaaatattaaaataagggattctaaaattgcgaaggaagaaaaaactatagaa
attgctagggcgtgtgtaaataaggatcaacgaaaagagggagatagaaaagagactgca
ggaagttctaataatccaggaaatagtaatgattctggagaaaatagaggagctcttgat
gaagctgcagcaacaaatttgaccgattttctttctgataactggcaggcattaacagat
aggaaaatgtttgctgttataccattaaaagaatgcccacatttaaataccgttaacaat
gtacctccttgcggtattgatatacatttaccatgcatcgaatgtaatagtaagactgaa
aattggatttgtctacaatgttacactgtacattgtgcaagaaatatcaatcagcatgca
ttgttacattccgatgaaactttgcatcctttgactttaagttttagcgacttgtcagtt
tggtgttatggatgctcagcttatattgataatccgagattatacgcggctcgaaatgct
gcgcatctgagtaaatttaatcaagaagcaccatggatttacggggtacaatga

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