Pseudomonas chlororaphis PA23: EY04_09600
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Entry
EY04_09600 CDS
T03201
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EY04_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_09600
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EY04_09600
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EY04_09600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AIC19148
LinkDB
All DBs
Position
2129328..2131343
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AA seq
671 aa
AA seq
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MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAAPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVAVEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYENELRSPSEIAKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgcttccagcccgccggcgatcagccggaagccatc
cgcctgatggtcgagggcatcgaggccgggttggcgcaccagacactgctcggtgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgcccgaccctg
gtgctggcgccgaacaagaccctggccgcgcagctgtacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtacttcgtttcctactacgactactaccagccggaagcctat
gtgccgtcctccgacacctttatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgtctgtcggcgaccaaggcgctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcctgcatctacggcctgggcagcccggaaacctatctgaagatggtgttgcacgtc
gatcgcggcgacaagctcgaccagcgcgccttgctgcgccgcctggccgacctgcaatac
acccgcaacgacatggattttgcccgcgccaccttccgcgtgcgtggcgatgtgatcgat
atctacccggcggaatccgacctggaagcgatccgcatcgagctgttcgatgacgaggtg
gaaagcatctccgccttcgacccgctgaccggcgaggtgatccgcaagctgccgcgtttc
accttctatcccaagagccactacgtgacgccgcgggaaaccctgttggatgccatcgag
gggatcaaggtcgagctgcaggaacgcctggaatacctgcgcagcaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgagctgggc
tactgcaacggcattgaaaactactcgcgctacctgtccggacggccggccggggcggcg
ccaccgaccctgtacgactacctgccggcggacgccttgctggtgatcgacgagtcccac
gtcagcgtgccgcaggtcggcgccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtggagtacggcttccgcctgccctcggcgctggacaaccggccgatgcgcttcgacgaa
tgggaaggggtcagcccgcagaccattttcgtctcggccacgccgggcaactatgaagcc
gaacatgccggccgggtggtcgagcaggtggttcgccccaccggcctggtcgacccgcag
gtggaagtgcgtccggcgctgacccaggtcgatgacctgctgtcggaaatcaccaagcgc
gtggccgtggaagagcgggtcctggtgaccaccctgaccaagcgcatggccgaggacctg
accgattacctcgccgatcacggcgtgcgtgtgcgttatctgcactcggacatcgacacc
gtggagcgggtcgagatcattcgcgacctgcgcctgggcaccttcgatgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggcgattctcgat
gcggacaaggaaggtttcctgcgttccgagcgctcgttgatccagaccatcggtcgtgct
gcgcgtaacctcaacggccgggcgattctctacgccgaccgcatcaccggctccatggag
cgggcgattggcgagaccgagcgccgtcgcgacaagcagatcgccttcaacctggccaat
ggcatcacccccaaaggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggttcgcgcagcaagaagcgcaaaggcatggccaaggccgccgaggaaaatgcccgc
tacgaaaacgaactgcgttcgcccagcgagatcgccaagcgcattcgccagctcgaagag
aagatgtaccaactggcccgcgacctggaattcgaagccgcggcgcagatgcgcgacgaa
atcggcaagctgcgcgagcgtttgctgacggtctga
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