Pseudomonas chlororaphis PA23: EY04_30340
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Entry
EY04_30340 CDS
T03201
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EY04_30340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_30340
Enzymes [BR:
pch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EY04_30340
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EY04_30340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AIC23054
UniProt:
A0A0D5XRB0
LinkDB
All DBs
Position
complement(6648440..6649219)
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgaggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatccagccttccaactggatggctacttcctttatgcctgcgatgcc
gaagttcccgcccaaggcggtgtggctttgtactcgcggttgcaaccgaaggctgtcatc
agcggtctcggcttcgagacggccgaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccttccgggcagaacggcgatgaagacttgaac
cagaagttcaagcttatggacgacttcgcccgttacctggataaacagcggcgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgtgacagccagcaatctccgggtttcctggcgcctgagcgtgcctggatggacgag
attgtcggcaacatgggttatgtcgatgccctgcgcgaagtcagccgtgaaggcgatcaa
tacagctggtggccggacaacgaacaggccgagatgctcaacctgggctggcgcttcgac
tatcagctgctgaccccaggcctgcgtcgcttcgtgcgcagcgcacgcctgccacgccag
ccgcgcttctcgcagcacgcgccgctgatcgtggactacgactggacgctgaccatctaa
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