Pseudomonas cichorii: PCH70_25780
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Entry
PCH70_25780 CDS
T03002
Name
(GenBank) type VI secretion protein, EvpB/VC_A0108 family
KO
K11900
type VI secretion system protein ImpC
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_25780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pci02044
]
PCH70_25780
Secretion system [BR:
pci02044
]
Type VI secretion system
Imp/Vas secretion system core components
PCH70_25780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AHF67731
LinkDB
All DBs
Position
complement(3010160..3011635)
Genome browser
AA seq
491 aa
AA seq
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MSTSAAQQKSNESGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVSK
DDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRESEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacagcaaaagagcaacgagagcggcgaatacagcattctcgac
agcatcattgccgaaacccgcctgacaccggacgacgaagcctacgacatcgccaagcgc
ggcgtatctgccttcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaag
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaattctgcaccaccctgacttccagtccctggaatcgtcctggcgtggtctgcaattg
ctggtcgatcgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaag
gacgacctgctggacgacttcgaagattcgccggaagtgatgcagtcgggtctgtacaag
cacatctacaccgctgaatacggtcagttcggtggacaaccggttggcgcgatcatcgcc
aactactacatgtccccaagctccccggacgtgaaactgatgcagtacgtctccagcgta
gcctgcatgtcccacgcgccgttcattgccgctgccggcccgaaattcttcggcctggaa
agcttcaccggtctgccggacctcaaggatctgaaagatcacttcgaaggcccgcaattc
gccaaatggcagagcttccgtgagtcggaagactcccgttacgttggcctgaccgtgccg
cgcttcctgctgcgcaacccgtacgatccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgtcgccaacagccacgagcactacctgtggggcaacacggcctacgcgttc
ggcaccaagctgaccgacagtttcgccaagttccgctggtgcccgaacatcatcggcccg
cagagcggtggtgctgttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaggttctggtttccgaccgccgtgaatacgaactggccgag
gaaggcttcatttccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgca
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcagcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ctgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactcaacaagtggattcgccagtacgtggccgaccaggaaaacccaagcgccgaagtg
cgtggccgtcgcccgctgcgcgctgcccagatcatcgtcagcgatgtagaaggggagccg
ggctggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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