Pseudomonas cichorii: PCH70_46780
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Entry
PCH70_46780 CDS
T03002
Name
(GenBank) sensor histidine kinase/response regulator
KO
K20972
two-component system, sensor histidine kinase RetS
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_46780
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pci01001
]
PCH70_46780
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pci02022
]
PCH70_46780
Protein kinases [BR:
pci01001
]
Histidine kinases
Other
PCH70_46780
Two-component system [BR:
pci02022
]
Other families
Unclassified
PCH70_46780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HisKA
7TMR-DISMED2
HATPase_c
7TMR-DISM_7TM
Motif
Other DBs
NCBI-ProteinID:
AHF69831
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Position
5421494..5424223
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AA seq
909 aa
AA seq
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MLTAKAEHGAGWSTLLDEQASLQLNDIRSARYQNQFSPIDLERVTAADRDSALWLHYRVP
PTRHEQLIRIFAPDLASGDLYIIEGEKLVDHLRTGNDVPKQDQRLPSNDFLLPVPQSDVP
LDLYLRLVSTQKLRPSITLQPAIASAADEREPFLFGLLFGALIMLIIQNLTRYWHTKSRS
NLWLAACETLLALSAFLLLNLIDMAKTWHIAQTPGAHVALLLAAVAGLFYTYCFFVHRGI
KVLDRLMQVDAVLMGTGVLLVLLFDSVPLNVMTFLLVSLTTLSILTVSVWHWQKGYRPAR
TFVASMILFNLGYLVIVPGLLWLSLIPPQWLILALLGVFCICGLLMSIALNERSRSITED
KFSLSRDQAASTAEVNAKAEFLAKISHEIRTPMNGVLGMTELLLDTPLSVKQRDYVETIH
SAGNELLTLINEILDISKLESGQIELDDVQFDISALIEDCLNIFRAKAEQQNVELISLIH
PQVPRVISGDPTRLRQTLLSLLENALKKTEEGEILLAVALDSKPGKHRVRISVQDSGMPL
SAEERDALMHTELHSKHFLTSNKLGGHLGLVIARRLTELMDGEFGIQNGHTQGTTLWLSL
PLDAKLLEQPTTDLDGPLKDARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALL
RTKANLRDYFDVVLLDQNMPGMSGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARN
AGIKRILAKPVAGYTLKTTLADELTQLNKGVVPLSSQPALNTPVSVPGDFRILVAEDNTI
STKVIRGMLGKLNLRPDTASNGEEALRAMKAQRYDLVLMDCEMPILDGFSATEQLRAWEV
GNQRVRTPVVALTAHILTEHKDRARQAGMDGHMAKPIELSQLRELIEYWVEQREATRTLT
SNGNLYQQN
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgctcacggccaaggccgagcatggcgctgggtggtccacgctgctcgacgaacaggca
agcctgcaactgaacgatatccgctcggcccgctaccagaaccagttcagccccatcgac
cttgaacgggtcacggcagccgaccgcgacagcgcgttatggctgcactaccgggtacct
cctacccgacacgaacaactgatacgcatcttcgcgccagacctggccagcggagacctg
tacatcatcgaaggcgaaaagctggtcgaccacctgcgcaccggtaacgatgtgcccaag
caggatcagcgactgccctccaacgatttcctgctccccgtcccgcaaagcgatgtcccg
ctggacctgtacctgcgactcgtctcgacccagaaactgcgccccagcatcacgctgcaa
ccggcgatagccagcgcggccgacgagcgcgaacctttcctgttcggcctgctgttcggc
gcgctgatcatgctgatcatccagaacctcacgcgctactggcacaccaagtcgcgcagc
aacctgtggctggccgcctgtgaaaccctgctggcattgagcgcgttcctgctgctcaac
ctgatcgacatggccaagacctggcatatcgcgcaaacgccgggggcccacgttgcgctg
ttgctcgccgccgtggccggcctgttctacacctactgcttcttcgtgcatcgaggtatc
aaggtactcgaccgactgatgcaggtcgatgccgtgctcatgggcaccggcgtgctgctg
gtactgctgttcgatagcgttccactcaacgtcatgaccttcctgctggtttccctgacc
acgctgagcatcctgacggtatcggtctggcactggcagaaaggctaccgtccggcgcgg
acgttcgtggcctcgatgatcctcttcaacctcggttatctggtgatcgtgccgggtctg
ttgtggctgagcctgatcccgccgcaatggctgatcctcgccctgctgggggttttctgt
atctgcggcctgctgatgagcatcgcgctcaacgaacgctcgcgcagcattaccgaagac
aagttcagcctgagccgcgatcaggccgccagcacggcggaagtcaacgccaaggccgag
ttcctggccaagatcagccacgaaatccgcacgcccatgaacggcgtgctcggcatgacc
gaactgctgctggataccccgctttcggtcaagcagcgcgactatgtggaaaccatccac
agcgcaggcaacgaactgctgacgctgatcaacgagatccttgatatctccaagctcgag
tcgggccagatcgaactcgatgacgtgcaattcgatatcagtgccctcatcgaggactgc
ctcaacatattccgcgccaaggccgaacagcagaacgtcgaactgatcagcctgatccat
ccccaggtgccgcgagtcatcagtggcgacccgacacgtctgcgccagacgctgctgagc
ctgctggaaaacgcgctgaagaaaaccgaagaaggcgaaatcctgctggcggtcgcgctt
gactccaagcccggcaaacatcgcgtacgcatctcggtacaggacagtggcatgccgttg
tctgcggaagagcgcgatgccttgatgcacaccgaactgcacagcaagcacttcctgacc
agcaacaagctcggtggccacctggggctggtcattgcgcgccggctgacagagctgatg
gatggcgagttcggtatccagaacggccacactcaaggcaccacactctggctgagcctg
ccactggacgccaagctgctggagcagccgaccaccgatctggacggcccgctcaaggat
gctcgcgtgctggtggttgatgacaacgatacctgccgcaaagtgctggtgcagcagtgc
agcgcctggggcctgaacgtcagtgccgtgccgtccggcaaggaagcgctggcgttgctg
cgaaccaaggcgaacttgcgcgactatttcgatgtggtactgctcgatcagaacatgccc
ggcatgagcggcatgcaactggcggccaagatcaaggaagacccgagcctcaatcacgac
atcctgttgatcatgctcaccggtatcagcaacgcgcccagcaagatcatcgcccgcaat
gccggcatcaagcgcattctggccaaaccggtggctggctatacgctcaagaccacgctg
gcagacgaactgactcaactgaacaagggtgtcgttccgctttcgtcgcagcctgccttg
aacacgccggtcagcgtgcccggcgacttccgtattctggtagccgaagacaacaccatc
tcgaccaaggtcattcgcggcatgctcggcaaactcaacctgcgccctgacactgccagc
aacggcgaagaggcgctgcgagccatgaaggcacagcgttacgacctggtgctcatggac
tgtgaaatgccaatcctcgatggcttctcggccaccgagcaactgcgggcctgggaagtg
ggcaaccagcgggtgcgtactccggtagtagccctgacggcgcacattctgaccgaacac
aaggatcgtgcccgtcaggcgggtatggacgggcatatggcaaaacccatcgagttgtcg
cagttgagggagttgatcgaatactgggtcgaacagcgtgaggcaacccgcaccctgacg
tctaatggcaacctctaccagcagaactga
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