Proteus terrae subsp. cibarius: F9282_05295
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Entry
F9282_05295 CDS
T06330
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9282_05295 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcib03019
]
F9282_05295 (rhlE)
Enzymes [BR:
pcib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F9282_05295 (rhlE)
Messenger RNA biogenesis [BR:
pcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F9282_05295 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGW02430
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All DBs
Position
1153327..1154751
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AA seq
474 aa
AA seq
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MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLSQSATKTKGRQPVKALILTPTRELAAQIAENVKAYSRYIPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSKEITGLANSLLNDPVSISVAPRNSAAESVDQHVHLVDKKRKTELLSHL
IGLENWSQVLIFTRTKHGANKLAEHLNADGIKSAAIHGNKSQGARTRALADFKEGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHGLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKPKNNAPRRSGGGHGRADIRGKDNRNNSRK
DGDSEGKESGRNKSKENYRNKDGSRTGKLGPRRSRKSDEGSDNQSPWSKARKEF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacagcaggcgattgagccgattttggcgggtaaa
gacgtattagcgagtgcgcaaacgggcacaggtaaaacagcagcttttacattaccaata
ttggaaaagctgtctcaatcagcaaccaaaacaaaaggtcgtcaacccgttaaagcgctg
attttgacaccaacgcgtgagctggcagctcaaattgctgaaaatgtaaaagcgtatagc
cgttatattccaattcgttcgttagtcgtttttggtggagtaagcattaatccacaaatg
atgaaattacgtggtggtgttgatgtactgattgcaacaccgggacgtttactcgatctt
gaacatcaaaatgcagttgatctttctcgcgttgaagttttagtgcttgatgaagctgac
cgtatgttagatatgggttttatccacgatattcgccgtgtaattaataaattaccgaaa
aaacgtcaaaatttactattttcagcgacattctctaaagagatcactggtcttgccaat
tctctattaaatgatccggtgagtatttccgttgcaccaagaaactcagcagcggaatct
gttgatcaacatgtgcatttagttgataaaaagcgtaaaaccgagctgttatcacattta
attggtttagaaaattggtctcaagtgctgattttcacccgtactaaacatggtgcgaat
aaacttgctgaacatttaaatgcagatggtattaaatcagctgctattcatggcaataaa
agccaaggtgcgagaactcgcgcattagctgattttaaagagggtaaattaaaagcatta
gttgcaacagatattgccgctcgtggtcttgatatcgaccaactgccgtatgttgtcaat
tttgaattaccacaagtcgcagaagattatgttcaccgtattggtagaacaggccgcgct
gctgcaacgggtaaggctatttcacttgtctgtgttgatgaacatggtttattagctgat
attgagcgtttattaaaacgtgaaattccacgtttagcgttagaaggttacgatcctgac
ccttcaattaaagcagcgcctttgcataaaaaaccaaagaataatgcaccacgtagaagt
ggcggtggtcatgggcgtgcagatattcgtggtaaagacaatcgcaacaatagtcgtaaa
gatggcgatagtgaaggcaaagagtctggacgtaataaaagcaaagaaaactaccgaaat
aaagatggctctcgtactggaaaattagggccccgtcgttcacgtaaaagtgatgaaggt
agtgataatcaaagcccttggtcaaaagctagaaaagagttttga
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