Paraburkholderia caledonica: CUJ87_30865
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Entry
CUJ87_30865 CDS
T05740
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CUJ87_30865 (ltrA)
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
CUJ87_30865 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
Motif
Other DBs
NCBI-ProteinID:
AXF19048
UniProt:
A0A2Z5MQQ3
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All DBs
Position
pPHRS4:complement(39850..41118)
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AA seq
422 aa
AA seq
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MALHAKAKAEAGYRFYALYDKIYREDLLAHAYAQCRSNKGAPGVDRQDFAEVEAYGVQKW
LGELALALRQESYRPDPIRRVFIPKANGKLRPLGISTLRDRVCMTAAMLVLEPIFEADLP
SEQYAYRPGRNAQQAVIEVEERLHRGQTDVVDADLADYFGSIPHAELMLSLARRIVDRRV
LHLIRMWLECPVEETDTRGRKKRTTEAKDSRRGIPQGSPISPLLANIYMRRFVLAWKKLG
LQRSLGSRIVTYADDLVILCKTGKAEEALLRLREIMGKLKLTVNEEKTRICKVPEGEFDF
LGYTFGRLYSATTGQARMGMRPSKKSIRRMVEKIHAMTALKTVWQETTELVGKLNRTLRG
WANYFNVGTDRRAYRALDNYTAARLRRWLRNKYKVRRRRGGTYPSQHLYGHFGLVRLTGP
WL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacacgcgaaagcgaaggcagaagccgggtatcgcttctatgcgctgtacgac
aagatctaccgcgaggatttgctggcgcatgcgtatgcccagtgccgttcgaacaagggc
gcgccgggtgtcgatcggcaagacttcgcggaggtcgaagcgtatggggtgcagaagtgg
ctcggcgaactggcgcttgcgctcaggcaggagagttaccggccggaccctatcagaaga
gtgtttatcccgaaggccaatggcaagctgaggccactgggcatctcgaccttgcgagat
cgggtgtgcatgacagcagcgatgctggtgctcgaaccgatcttcgaagcggaccttcca
tcagagcagtacgcttaccgcccggggcgaaacgcccagcaagcggtgatcgaggtggaa
gagcggctgcatcgagggcaaacggacgttgttgatgccgaccttgcggactacttcgga
agtattccacacgccgaactgatgctgtcgctcgcgcgacgcatcgttgatcggcgcgtg
ctgcatctgatccggatgtggctggaatgccccgtggaagaaaccgatacccgaggccgg
aagaaacgtacgacggaggccaaagacagcagacgtggcattccgcaaggctcacccatc
tcaccactgctggcgaatatttatatgcgccggtttgtgctggcatggaagaagctcgga
cttcagcgcagtcttggtagtcgaatcgtgacctacgcggatgatctggtgatcctgtgc
aagacgggtaaggctgaggaagccttgctgcgtctgcgcgagatcatggggaagctgaag
ttgacggtcaacgaggagaagacacgaatctgcaaggtgccggaaggcgaattcgacttc
ctgggctacacgtttgggcggttgtactctgcgacgacagggcaggcccgtatgggcatg
cggccgtcgaagaagagtatccggcgtatggttgagaagattcatgcgatgaccgctctt
aagacagtgtggcaagagaccacggaactggtgggcaagttgaaccgcacgctacgcggc
tgggcgaactacttcaatgtaggcacggacagacgcgcgtatcgcgcgctcgacaactac
accgctgcgcggttgcgccggtggttacgcaacaagtacaaggttcgacgtcgcaggggc
gggacttatccatcccagcacctttacgggcacttcggtctcgtgcgtctgactggtccc
tggttgtga
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