Pedobacter cryoconitis: AY601_0554
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Entry
AY601_0554 CDS
T04341
Name
(GenBank) transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcm03000
]
AY601_0554
Transcription factors [BR:
pcm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AY601_0554
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AMP97508
UniProt:
A0A127V937
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Position
635077..635973
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AA seq
298 aa
AA seq
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MSDFRLEVFYTVAKRLSFTKAAAALFITQPAVTKHIYELEQQYDNKLFERKGNKIQLTPA
GELLLSHTESLFNIYRNIDFDMNALVHKKEGILALGASTTISQYVIAPILAGFRKKFSAI
AINLMNGNTEQIEKALLDKEIQLGIIEGRSKHQEISYTEFIRDEIVLVCGQDHPLAKKSE
LSKALLLENSFVMREQGSGTLEVIDYALKEIGMGVSDLKAEIHLGSTESIKSYLMHSNCL
AFISIHALTNELQRGTLRVIDVAGLHIERHFYFIHLQGKPDGLSEVFLRHARLTHHLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttcgtttagaagttttttataccgtagccaaacggcttagttttactaaa
gctgccgctgctttattcatcacacaacctgcggtgaccaagcatatttatgaattggaa
cagcaatatgataataaactttttgagcggaaggggaataaaattcagctgacacctgcc
ggagagctcttactcagtcatacggaatcattatttaatatctatcggaatattgatttt
gatatgaatgccctggttcataaaaaagaaggaattttagcattaggggccagcactact
atttcccagtatgtaatcgcgccgatccttgcagggttcaggaaaaaattcagcgcaata
gcaatcaatttgatgaatggaaatactgaacagatcgagaaagctttactggataaagaa
attcagcttggaattatagagggaagatctaaacatcaggaaatcagttataccgagttt
atcagagatgaaattgtattggtttgcggtcaggaccatcctttggctaaaaaatccgaa
ctcagtaaggcgttactgctggaaaattcttttgtaatgcgtgagcaggggtcaggcaca
cttgaagttatagattacgctttaaaagagattggaatgggggtatcagaccttaaagca
gaaatacaccttggcagtaccgaaagtattaaatcttacttaatgcattctaactgcctg
gcttttatctctatacatgcgctaaccaatgaacttcagcgcggaactttaagggtgatt
gatgtagcaggactccacatagaacgtcatttctattttattcatcttcagggtaagcca
gatggtttatcggaggtttttttacggcatgcccgcttaactcatcacctgaagtaa
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