Pedobacter cryoconitis: AY601_3677
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Entry
AY601_3677 CDS
T04341
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AY601_3677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_3677
DNA repair and recombination proteins [BR:
pcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AY601_3677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_27
SbcC_Walker_B
DUF6884
DUF2491
Motif
Other DBs
NCBI-ProteinID:
AMQ00539
UniProt:
A0A127VHY4
LinkDB
All DBs
Position
complement(4353403..4354506)
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AA seq
367 aa
AA seq
DB search
MWLKNITLLNFKNYSDADLRFSKTVNAFIGNNGAGKTNLLDAIHYLCLCKSYFNPIDSQQ
IKTAEELFMIQGDFDRQEKNEKITCGVKKNQKKQFKRNKKEYDKLASHIGLFPLVMISPY
DVTIIMDGSEERRKFMDNVISQTDSQYLDELMLYNRHLLNRNALLKQIATTRRYDPALLE
IFNEQLIGCGEKIFAKRKQFMVDYIELFNKYYQYLTEDAEQVCLTYQSQLNDTPFETLLL
QTVEKDKVLERTTTGIHKDDLIFTILDMPLKKFGSQGQQKSFLIALKLAQYAYVEKYKGF
KPLLLLDDIFDKLDERRMHKLMEMVSHHDFGQIFITDTGKERVLNIFDKIKVPVTLFEVI
NGGIQHA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaaaacattactctgctcaacttcaagaattattctgatgctgatttacgg
ttttcaaaaacggtgaacgcatttattgggaataatggtgccgggaagaccaatttactc
gatgcgatccactacctgtgcctttgcaagagctatttcaatccgattgatagtcagcag
atcaaaactgcagaagaactttttatgatccagggcgatttcgaccgtcaggaaaaaaac
gagaagatcacctgtggtgtcaagaagaatcagaaaaagcaatttaagcggaataaaaaa
gaatacgataaactggccagtcatatcggcctgtttccattggtcatgatttcgccttat
gatgtcacgatcattatggatgggagcgaagagcgccgtaagtttatggacaatgtgatc
tctcagaccgattcacaatacctggacgaactgatgttatacaacaggcatctgcttaac
agaaatgctttactaaagcagatcgctactacacgccgttatgacccagctttgcttgaa
atctttaatgaacagctgattggttgcggagagaagatttttgcgaagcgcaaacaattt
atggtagattatatagaactgtttaataagtactatcaatatctgacagaagatgcagaa
caggtttgtttaacttatcaatctcagttaaatgatactccatttgaaactttactgctg
caaactgtagaaaaagataaagtactcgaaagaacaactaccggaatccataaagatgat
ctgattttcaccatccttgatatgcccttaaagaaatttggctcacaaggacaacagaaa
tctttcctgatcgcattaaaactcgcacagtatgcttatgtggaaaaatataaaggcttc
aaacctttattgttattagatgatatttttgataagctcgacgaacgccggatgcataaa
ctgatggaaatggtttctcaccatgacttcggacagatttttattaccgatacggggaaa
gaaagagtcctgaatattttcgataagatcaaagttcccgtaactttatttgaagtaata
aacggagggatacaacatgcgtaa
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