Cutibacterium acnes 6609: TIB1ST10_04265
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Entry
TIB1ST10_04265 CDS
T02065
Name
(GenBank) putative ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pcn
Cutibacterium acnes 6609
Pathway
pcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TIB1ST10_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcn03019
]
TIB1ST10_04265
03009 Ribosome biogenesis [BR:
pcn03009
]
TIB1ST10_04265
Enzymes [BR:
pcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
TIB1ST10_04265
Messenger RNA biogenesis [BR:
pcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TIB1ST10_04265
Ribosome biogenesis [BR:
pcn03009
]
Prokaryotic type
rRNA processing factors
TIB1ST10_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
S1
Motif
Other DBs
NCBI-ProteinID:
AEH29161
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All DBs
Position
906908..909532
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AA seq
874 aa
AA seq
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MLDETDNTTLKSGGNSTAGIPAPRRRRAASRPAGAPAPVETMGAPVAITAAGSGGSIVTS
DVEASDLPRPPMGRRRKATSTPHDVKTDVPKVVSLEPTPEEPESADTRTQEKPRRTRRGA
SETAPSTEAERGTSQRRRATRRRSSRSAEKIEGTTEATTATNKGDGADDDPINVALTEAK
ARARNHKVEGALANPFGFKEGEERSASDILDSLAAEIGGGEAAIPKRRRRRATRPSEAGS
HSAETSGSTDKVAPVEEDKGEIKDRHSSDKKSEKSDYDTTDVVEETVADTEEDGQNRRRR
RRGGRRRRRSEDTEDSASEDESSDSDDSQTSSDNDSESSSSDATHRRRRRRRRRGEDISG
SDDDPSDVVIKVREPRSRQSVADEVTGIEGSTRVEAKKQRRREGRAAGRRRSAVITDAEF
LARRESVDRKMIVRQSDDYSQLAVLEDGVLVEHYVDRASATSSIGNIYLGKVQNVLPSME
AAFIDIGRGRNAVLYAGEVDWAKYGKEGEDKRIEHVLKSGDQVLVQVTKDPVGAKGARLT
SHISVPGRFVVYSPGGHLSGISRKLADSERKRLKKIVENNIPSDASVIVRTAAEGATEED
LVRDINRLKVQWEVIERKVSNSKAPLMLYTEPDLTVRIIRDLFTADFSELVIAGNGGPDD
AYDTIKAYVDHVAPEMASRLIHWEHTDKDPFAEYRIDEQVAKALERKVYLPSGGSLVIDR
TEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLPT
NRELLVRRLTECLGRDRTRHQVAEVTSLGLVQMTRKKIGTGLAEAFTEQCEACGGRGYRR
FDKPVDSQAPADGGERSKGRGRGHKGSSGKSHSK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgagactgacaacaccacactgaaatctggcgggaattccactgctggaatt
cccgctcctcgacgtcgtcgggccgcgtcgcgccccgctggggctccggcccccgtcgag
acgatgggcgcgcccgtggcgattaccgctgcaggatcaggcggttcgattgttacttcc
gatgtggaggcttctgatctgcctcgtcccccgatggggcgacgtcgcaaggcgacgagc
actccgcacgacgttaagactgatgttccgaaggtcgtctccctagagccgacgccggag
gagcccgagtccgcggacacaaggacccaggagaagccgcgtcgtacccgtcgtggtgct
tctgaaaccgcgccgtccaccgaggcagagcggggtacctcccagcgtcgtcgcgccact
cgccgtcgctcctctcgatccgcagaaaagattgagggaacgactgaggcgacgaccgcg
accaataagggcgatggtgctgacgacgatcccatcaatgtcgcactgactgaagccaag
gcccgggcccgtaaccataaggttgagggtgccctagctaacccctttggatttaaagaa
ggcgaagagcgctccgcgagcgacatcctcgactctttggccgctgagatcggtggggga
gaggctgctataccgaagcgccgtcgccgtcgtgccactcgaccgtccgaggctggtagt
cactctgcggagacctccgggagcactgacaaggtggccccggttgaggaggataagggc
gagatcaaggaccgccacagttccgataagaagagcgagaagtctgattacgacaccacg
gatgtggtggaggagactgtcgctgacaccgaggaggacggccagaaccgtcgtcgccgt
cgtcgcggtgggcgtcgccgtcgtcgcagtgaagacaccgaggacagtgcgtctgaggac
gagtcgagcgatagtgacgactcacaaaccagctctgacaatgattctgagtccagtagc
tcggatgccactcaccgtcgccgtcgtcgccgtcgtcgccgtggcgaggacatcagcggt
tctgacgacgaccccagcgacgtcgtcatcaaggtgcgcgagccgaggtcgcgtcagtcg
gtggctgatgaggtcaccggtatcgagggttcgactcgtgtcgaggctaagaagcagcgt
cgtcgggagggacgtgccgccggacgtcgccgcagtgccgtcatcaccgacgcggagttc
ctggcccgtcgcgagtcggtcgaccgcaagatgattgtgcgtcagtctgatgactactct
cagctggcggtgctggaagatggggtgctcgttgagcattacgttgaccgcgcttctgcc
acctcctcgatcggcaatatctacctgggtaaagtgcagaacgtcttgccgtcgatggag
gccgccttcattgacattggccgtggtcgcaacgctgtgctctacgccggagaggttgat
tgggccaagtatggcaaggagggcgaggataagcgcatcgagcacgtgctaaaatccggc
gaccaggttctggtacaggtcaccaaggatccagtgggtgccaagggtgcccgtttgact
agccatatttcggtacccggacgctttgttgtctattcgcctggcggccacctttcgggg
atttcccgcaagctggctgattcggagcgcaaacgccttaagaaaatcgttgagaacaac
atcccgtcggatgcttccgtcatcgtgcgcactgccgcggaaggagccaccgaggaagac
ctggtccgtgacattaaccgtcttaaggttcagtgggaggtcattgagcgcaaggtcagc
aacagcaaagctccgctgatgctatacaccgagcccgatttaacggtgcgtatcatccgc
gacttgttcactgcggacttctccgagcttgtcattgccggcaatggtggccccgatgac
gcctacgacaccattaaggcctacgttgatcacgtggctccggagatggcgtcgcggtta
atccattgggagcacaccgacaaggacccctttgccgagtaccgcattgacgagcaggtc
gcgaaggctttggagcgcaaggtttacctcccgtcgggagggtcccttgtcattgaccgc
accgaggctatgacggtgatcgacgtcaataccggaaagttcaccgggtcagcgggtaac
cttgaggccactgtcactgctaacaacttggaggcggctgaggagatcgtgcgtcagcta
cgattgcgcgatattggtggaatcattgtcattgacttcatcgacatggtgctgccgacc
aaccgtgaacttctcgtgcgccgtctcaccgaatgcctgggccgggatcgtacccgacac
caggtcgctgaggtgacatcgctgggcttagttcaaatgacccgcaagaagatcggtacc
gggctggctgaggctttcactgagcagtgcgaggcctgtggcggtcgcggctaccgccgc
ttcgataagccggtcgattcccaggctccggccgacggtggcgaacgctcgaagggtcgt
ggtcgcggtcataaaggctcgtcgggcaagtcccactccaagtga
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