Phanerochaete carnosa: PHACADRAFT_203883
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Entry
PHACADRAFT_203883 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PHACADRAFT_203883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_203883
Enzymes [BR:
pco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PHACADRAFT_203883
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PHACADRAFT_203883
DNA repair and recombination proteins [BR:
pco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PHACADRAFT_203883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
LNS2
Fpg-like_C
Cnd2
Motif
Other DBs
NCBI-GeneID:
18912234
NCBI-ProteinID:
XP_007390178
JGI:
Phaca1_203883
UniProt:
K5VCR5
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MPELPEVERAAALLRTLAKGKQIARVEAVEDNLVFSDTTHSEFEKELEGRTVKDVARYGK
VFYFDLDGDGRMPVLHFGMTGMLQVKGQLATYYKETPRKASTDWPPRFMKFILHIRDETT
GSTTEVAFLDARRLGRVRLVKSPLEEPPISALGFDPILSMPKLEPFKVQVLRRTCPIKAL
LLDQSFSAGVGNWVADEVLYHARIHPERRCHTLDDTELAALHLQTHQVCQTAVDVNADDA
KFPGDWLFKHRWGKGKKKHTLLLPSGEPATIKWVTVGGRTSAFVAELQKLSGGVAGRSSR
SRRRAKSSAEDEGEGEGESESDLTPLEDEEVQTKPGRKRKVAVLEVTRRTRSRKT
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcttccagaagtcgagagagctgctgctctgctcagaacgctcgccaaaggg
aaacaaatcgccagggtcgaagcagtagaagacaatctcgtgttctcggacacgactcac
tcagaatttgagaaagaactcgaaggtcggactgtgaaggacgtcgctcgatatggcaag
gtcttctacttcgacctcgacggggacgggagaatgcctgtccttcatttcggcatgaca
ggcatgcttcaggtcaagggccagctggcgacgtattacaaagagacgccaaggaaagcg
tcgaccgactggcctcccaggtttatgaagttcatcttacacatccgcgacgagacgaca
ggcagtaccacagaagtagccttcctcgacgcgcgcaggctcggccgtgtacgcctcgtc
aagtcgccgctggaagagcccccgatctccgcgttagggtttgaccccatcctgtccatg
cccaaactagagcctttcaaggtgcaggtcttgagacggacctgcccaatcaaggcgctc
ctgctggaccagtcgttcagcgcgggcgtcggcaactgggtcgccgatgaagtcctgtac
cacgcgcgcatacacccagagcgccgctgccacacgctcgacgacacggaactcgcggcc
ctgcatctgcaaacgcaccaagtgtgccagacggcggtcgacgtgaacgcggacgacgcc
aagttcccgggggactggctcttcaagcatcgctgggggaaaggcaagaaaaagcacacg
ctgcttctcccctctggagagcccgcgacgatcaaatgggtcaccgtcggcggacggacg
tctgcctttgttgcagagctccagaagctgagtggtggggtggcaggtcgcagctcaagg
tctcgtcggcgtgctaagtcctccgcggaagacgagggcgagggcgagggcgagagcgag
agcgacttgacgccgctcgaggacgaggaagtccagacgaagcctggtcgcaagagaaag
gttgcggtcttagaggtgacaaggcggacgcgcagtaggaagacataa
DBGET
integrated database retrieval system
