Phanerochaete carnosa: PHACADRAFT_250735
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Entry
PHACADRAFT_250735 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_250735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_250735
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_250735
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
PHACADRAFT_250735
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
PHACADRAFT_250735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
18915009
NCBI-ProteinID:
XP_007392476
JGI:
Phaca1_250735
UniProt:
K5XAI1
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MADKEVIDLTTDDREIIIVESGDESHERPTKRARKSPLGPTSRGDTQEMMNVSVNTGAGA
EDRTKKFRRPGKKKRKKVTVVGDEDGEIIELEAAEDSGAVSRDDSREQTDAEGQSRDAPE
RASKTRAKDSVIRSLLDRLADAEDIPTVYAGDSLHRLDSDSRERKKRKKKRKRRDSDRER
TTTASTTNPDSAAKNAGDKSLDSDLFFIDETPAVISADAKLSNLIVTSPSTPATSNVTEK
ADEGGIPLLLPVHVSVSAGDHADESLQLILPPSPDSEDEAYIEYLDYDDDRRAPGVARYF
DDPADGTEPKTAKIVCKKCGAEGDHKTWNCPVIICLTCGVRNEHGTRSCPISKVCFTCGM
KGHINRDCPNRYAGRARMGGSNFDDCDRCGSSLHQINECPTLWRIYTYVEEPERLEILAA
REQKRELEIGEGGEGYIGPEDWCYDCGECGHLGDDCKTRSHHHDRPSDPSAFGTYNINTG
PFADAKNPQQRKPGKAASYAARMNDAWGDGYGHVLPLDVGKQGRKKERARMERRAQEVQA
DDADDWFAKRRGGNSREKGGGSGGGGSKGSRNGRINSKISFSDFDRDGDRFGGRDRRDGG
RPRLDDLPGPSRESDSIKIRGASRRDKERERRDRDDEWDGSIRGAARRQSEHEYDHRRNE
RPRDDRDRYGERDRRRERDRREASPRREPRYRGGYAR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggaggtcatagatctaaccaccgacgatcgcgagatcataatagtggag
tccggggatgagtctcacgaacggccgacgaaacgcgccaggaagtccccgctcggtcca
actagcagaggtgacacacaggagatgatgaatgtctcagtgaatactggtgctggtgct
gaagacaggacgaagaagtttcgcaggccagggaagaagaaacgcaagaaagtaacagtg
gttggggatgaggacggagaaattattgagctcgaggcggcagaggactcgggagcagtg
tcgagagatgattcgagagagcagactgatgcagaagggcagagcagggacgcgccagaa
agggcgagcaagacgagggcgaaagattcggtaatacggagtctgcttgacagacttgcg
gacgcagaagacatacctactgtgtacgcgggggacagcttgcataggctggactccgac
tcaagggagaggaagaagaggaagaagaaacgaaaacgccgagactccgaccgagaacgt
accaccacggcttccaccacaaacccagactctgcagccaagaacgcaggagacaagtcc
ttggactctgatctcttctttatagatgaaacccctgctgttatttccgcagacgcgaag
ctgtctaatttgattgtcacatctccatctacgcccgccacctcaaatgtcacggagaag
gcggacgagggcggaatacccctgctgctcccggttcatgtttctgtatccgctggagat
catgccgatgaatctctacagctaattttacccccttccccggactctgaggatgaggcc
tacatcgaataccttgattacgatgacgatcgacgggctcctggtgttgctaggtacttt
gacgaccctgccgatggtactgaaccaaagaccgccaagattgtctgcaagaagtgtgga
gcggaaggcgaccacaagacatggaattgtcctgtcatcatctgtctgacatgcggagtt
cggaacgaacatgggactcggagctgcccaattagtaaagtgtgctttacttgcggcatg
aaaggacacattaatagggattgtccaaatcgctacgctggtcgtgcgcgaatgggcggc
agcaatttcgacgattgcgatcgctgtggttcgtcgctccatcaaatcaacgaatgtccg
acattatggcgcatatacacctatgtcgaggaaccggagcggctagagatcctcgctgcg
cgtgaacagaagcgagaactcgagatcggtgaaggtggcgagggctacattggtccggaa
gattggtgctatgactgcggcgaatgtggccacttgggtgatgactgcaaaacaagatct
caccatcacgaccgcccctccgacccgtcagcgttcggtacgtataacataaacacgggg
cccttcgcggacgcgaagaacccgcaacaacgaaaaccgggaaaagctgcgtcgtatgct
gctcgaatgaacgacgcgtggggcgacggctacggccacgtgctgcctctggacgtcgga
aagcagggacggaagaaggagagggcacgcatggagcgccgcgcccaggaagtgcaagca
gacgatgcagacgattggttcgcaaagcgcagaggaggcaatagtcgtgagaagggcggc
ggaagcggtggcggcggatccaagggctccaggaacggccgaattaactcgaaaatctcc
ttcagcgattttgatagggatggcgaccgttttggcggacgcgaccgaagggacggcggg
cgaccccggctcgatgacctccctggaccttcgcgcgagtcggactcgataaagatccgg
ggcgcgtcaaggagagataaggaacgagagcgacgagacagggacgacgagtgggacggc
agcatacgaggtgcggcgcgcaggcagagtgagcacgagtacgaccatcggaggaatgag
cggccaagggatgatcgcgaccggtatggggagcgtgatcgaaggagggagcgtgaccgc
agggaggccagcccccgccgagaacccaggtaccgaggcggctacgctcgatag
DBGET
integrated database retrieval system
