Proteus columbae: F1325_15015
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Entry
F1325_15015 CDS
T06419
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcol
Proteus columbae
Pathway
pcol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F1325_15015 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_15015 (recC)
Enzymes [BR:
pcol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F1325_15015 (recC)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1325_15015 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF6774
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QHN11686
UniProt:
A0A6I7D7D6
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All DBs
Position
complement(3190618..3194001)
Genome browser
AA seq
1127 aa
AA seq
DB search
MFHIYHSNQLSLLKSLMVHFMQTRPLSSPFEQEVILVQSPGMSQWLQIQLAESLGIAANI
RYPLPATFIWEMFTRVLSGIPKESAFSKDAMTWKLMALLPEFLPNEEFKPLLHYLDDDED
KRKLHQLAGRVADLFDQYLVYRSDWLASWENDELIEGLSENQRWQKILWVALQQYTKDLN
QPQWHRSNLYQQFISTLNNAKEGELQHCFPPRIFICGISALPQVYLQALQAIGRHTEIYL
LFTNPCRYYWGDIQDPKFLSRLNSRKPRHYKQLHESPWFKDEKNASSLFNDEGEQNIGNP
LLASWGKLGKDNLYFLSELEYTDVLDAFVEIPRDNLLHQLQADILDLEDFSQLGTTLETY
ECSENKRVISPDDHSLTFHASHSPQREVEVLQDQLLHLLEQDPELLPRDIIVMVADIDSY
TPYIQAVFGNAPSERYLPFAISDRKARQAHPVLQAFITLLELPQSRFTAEQVLALLEVPA
LAGHFSIFENELKLLRRWVDESGIRWGLDDENVASFLLPITGKNTWEFGLLRMLLGYAME
SENGPWKGVLPYDESSGLVAELAGHLADFLYTLSDWRTRLSETRSLESWLEVGQQLVDAF
FESDEETELVLVLIIQQWQKVIENGLKAQYQNEIPLVLIRDELTVRFDDEKISQRFLAGS
INFCTLMPMRSIPFKAVCLLGMNDGIYPRNIQPLGFDLMAEKRRRGDRKRRDDDRYLFLE
ALSSAEKYLYISYIGKSIRDDRECNPSVLIKELQDYIGQNFRLPEDGELNVDDSAARINQ
HLLTQHSRVPFAQENFQIGAFFRSYASEWLPAASGQGMVHQTFTEPLNDDDTIDQVSVDA
LARFYRHPIRAFFQQRLKTNFVIEETELPEEEPFVINALQRYLLNQWLLKALIDQTSTEA
LFERIKAAGQLPASAFGQIYWEQQIEELLPLAEKIRSERLATHSVTLEQSFSAMPLIGRL
NEVQADGLLRWRPASLTANDLLQLWIEHLVYCLKQGTGESRFYGRKETQWCLLPVDPEFA
YSTLDKLISDYKQGLNSPLALFAKSGWAWLQACYDKKSQEFLLDDEETLEKAELVLMQHL
TDSYNRDGEMSDMYVQRAFSQLDEPFLQTVKQTALTIFKPIIPFLKK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatatatatcactcaaatcagttgtcattactaaagtcacttatggtgcacttt
atgcagaccaggccactttcttctccttttgaacaagaagtgatccttgtacaaagccct
ggaatgtctcaatggttgcaaatccagcttgccgaaagcttgggtattgccgctaatatc
cgttatccattaccagcaacctttatttgggaaatgtttactcgggtattatcaggtata
cctaaagaaagcgctttttctaaagatgcgatgacatggaaattaatggcattacttcct
gaatttttgcctaatgaagaatttaaacccttactgcattaccttgatgatgatgaagat
aaacgtaaacttcaccagttagcaggacgtgtagctgacttatttgaccaatatttagtt
tatcgttcagattggttagcttcgtgggaaaatgatgagttaatcgaagggttgagtgaa
aatcaacgctggcaaaaaatattgtgggtagcattacagcaatacacaaaagatcttaat
cagcctcaatggcaccgttctaatctttatcagcaatttatttcgactttaaataatgca
aaagaaggggagcttcaacactgttttccacctcgtatttttatttgtgggatttcggct
ctacctcaagtttatttgcaggcattacaagcgatagggcgtcatactgagatctattta
ctctttactaatccttgccgttactattggggagatattcaagatcctaaatttctctct
cgtcttaatagcagaaagccacgccattataagcaattgcatgaatcgccttggtttaaa
gatgaaaaaaatgcttcttcgttatttaatgatgagggcgagcaaaacatcggtaatccg
ctattagcatcatggggaaaactaggtaaagataatctttatttcctctctgaacttgaa
tataccgatgtgttagatgcgtttgttgagatcccaagagataatttacttcatcaatta
caagcagatattcttgatttagaagatttttcgcaattaggtacaacacttgaaacttat
gagtgtagtgaaaataaacgtgtgatttcaccagatgatcactcactgactttccatgca
agccatagcccacagcgcgaagtcgaagtactgcaagaccaattactgcatttattagaa
caagatcctgaattgttaccgcgcgatattattgtgatggttgcggatatcgatagctat
acaccttatattcaagcagtgtttggtaatgcaccttcagaacgttatcttccttttgct
atttcagatagaaaagcgcgtcaagcgcatcctgtattacaggcttttattacgttgcta
gaacttcctcaaagtcgttttaccgctgaacaagtgttggcactgcttgaagtccctgct
ttagcagggcatttttctatttttgaaaatgaactaaaactactacgtcgttgggttgat
gagtcaggcatacgctggggattagatgatgagaatgtggcttcattcttattgccaatc
acgggcaaaaatacatgggagtttggcttactgcgcatgttgcttggttatgcgatggaa
agtgaaaatggtccttggaaaggtgtgcttccttatgatgaatccagtggattagttgcg
gagcttgcaggtcatctcgctgattttctttatacattaagtgattggcgtacacgttta
agtgaaactcgttcattagaatcatggctagaagttggacaacaattagttgatgccttt
tttgagtctgatgaggaaacggaattagttttagtgcttattatccaacaatggcaaaaa
gtgattgaaaatggattgaaagcacaatatcaaaatgaaattccgctagtccttattcgt
gatgaattaacagtacggttcgatgatgaaaaaattagtcagcgttttttagctggcagc
attaatttctgtacactaatgcctatgcgctccattccctttaaggcagtgtgtttatta
ggtatgaacgatggtatttatcctcgtaatattcagccgttaggatttgatttaatggcg
gaaaaacgccgtcgcggtgatagaaaacgtcgtgatgatgaccgctatttattccttgaa
gcgcttagctcagctgaaaaatacctttatatcagctatatcggaaaatcgatccgtgac
gatcgagaatgcaatccatcagtcttaatcaaagagttacaagattatattgggcaaaat
ttccgtttaccggaggatggtgaactcaatgtcgatgacagtgcggctcgtataaatcag
catctattaacacaacatagccgtgttccttttgctcaagaaaatttccaaataggcgct
ttctttcgttcttatgcctctgaatggctgcctgctgccagtgggcaaggaatggttcat
caaacttttaccgagccactaaacgatgatgacacaatagatcaagtctctgttgatgcg
cttgcacgtttttatcgtcatcctattcgagcattcttccaacaaaggttaaaaacaaac
tttgttattgaagaaacagaattacctgaagaagagccatttgtgataaatgctcttcaa
cgttatctattgaatcaatggttattaaaagcattaattgatcaaacctcaacagaagct
ttgtttgagcgtatcaaagcagcaggtcaacttcctgcaagtgcatttggtcaaatttat
tgggagcagcaaatagaagagttacttcctttagctgaaaagataagaagtgaacgatta
gctacacattctgtcacattagagcaaagctttagtgcaatgccattgattggtcgttta
aatgaggtacaagctgatggtttattacgttggcggccagccagcttaaccgctaatgac
ttattgcagctgtggattgagcacctagtttattgtttgaaacagggaacgggcgagagt
cggttttacggcagaaaagagactcaatggtgtttgttaccggttgatcctgaatttgcc
tattcaacgttagacaagttaatcagtgactataaacaagggttaaacagcccattagcg
ctatttgcgaaaagtggctgggcttggttacaagcttgctatgataaaaaatcacaagag
tttttacttgatgatgaagagacacttgagaaagcagaattagtactgatgcaacattta
acggatagctataatcgagatggtgaaatgagtgatatgtatgttcagcgtgctttctct
caattagacgagccttttttacaaacggtcaaacagacggcattaacaatatttaaacca
ataattccatttctgaaaaaataa
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