Pseudomonas chlororaphis subsp. aurantiaca: JM49_08185
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Entry
JM49_08185 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_08185
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_6
TetR_C_24
TetR_C_41
HTH_22
HTH_Tnp_1_2
LacI
Motif
Other DBs
NCBI-ProteinID:
AIS11663
LinkDB
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Position
complement(1746974..1747582)
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AA seq
202 aa
AA seq
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MTAPKRLTDLKREAIIQAAITEFHASGFDITSMDKIAATAGVSKRTVYNHFPSKEELFTE
IMHKLWASIRAQADILYHPGLTLREQLRELLMAKLQLLADDNFLNLARVAIAATLHSPER
AQYMVERMGEREESLMVWIRSARADGRLKPLDPDFAAQQLHGMLKAFAFWPQITMNQPPL
KEDEQQRVVESTLDMFLACYQA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccgaagcgcctgaccgacctcaaacgcgaagccatcatccaggcggcgatt
accgaattccacgccagcgggttcgatatcaccagcatggacaagatcgcggcaacggcc
ggagtgtccaagcgcacggtgtacaaccacttccccagcaaggaggagctgttcaccgag
atcatgcataagttatgggcgagcatccgggcgcaagcggacattctttaccaccccgga
ttaaccctgcgtgaacagttgcgggaattgctgatggccaagctgcaactgctggccgat
gacaacttcctcaacctggcgcgggttgcgattgccgctaccctgcattcccccgaacgc
gcccagtacatggtggagcgcatgggcgagcgggaagaaagcctgatggtgtggattcgc
tcggcccgggcggatggccggctcaagcccctggacccggacttcgccgcccagcagctc
cacggcatgctcaaggcgtttgccttctggccgcagatcaccatgaaccagccccccctc
aaggaagacgaacagcagcgcgtcgtcgagtccacgctggacatgttcctggcctgctat
caagcctga
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integrated database retrieval system
