Pseudomonas citronellolis: PcP3B5_07150
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Entry
PcP3B5_07150 CDS
T04637
Symbol
vfr
Name
(GenBank) Cyclic AMP receptor-like protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq02020
Two-component system
pcq02024
Quorum sensing
pcq02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PcP3B5_07150 (vfr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PcP3B5_07150 (vfr)
02025 Biofilm formation - Pseudomonas aeruginosa
PcP3B5_07150 (vfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcq03000
]
PcP3B5_07150 (vfr)
Transcription factors [BR:
pcq03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PcP3B5_07150 (vfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HTH_28
MarR_2
HTH_23
HTH_11
MltA
GntR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMO74219
LinkDB
All DBs
Position
complement(779674..780321)
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AA seq
215 aa
AA seq
DB search
MVAITLTPKHKNLDKLLAHCHRRRYTPKSTIIYAGDRCESLFFIIKGSVTVLIEDDDGRE
MIIGYLNSGDFFGEMGLFEKDGSAAQERSAWVRAKGECEVAEISYTKFRELCLQDPEILI
TLGSQMAERLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGR
IVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtagctattacccttacacccaaacacaaaaacctcgacaagttgctcgcacactgt
caccgccgccgctacaccccaaagagcaccatcatctacgccggggatcgttgcgaaagc
ctgttcttcatcatcaagggctcggtcaccgtcctgatcgaggacgacgatggccgggaa
atgatcatcggctacctcaacagcggtgatttcttcggcgagatggggctgttcgagaag
gacggcagcgccgcccaggaacgcagcgcctgggttcgcgccaagggtgaatgcgaggtc
gccgagatcagctacaccaaattccgcgaactctgcctgcaggatccggagatcctcatc
accctcggcagccagatggccgagcgcctgcgcaagaccacgcgcaaggtcggcgacctg
gccttcctcgacgtcaccggacgcgtcgcccgcaccctgttggacctgtgccagcagccg
gacgccatgacccaccccgacggcatgcagatcaagatcacccgccaggaaatcggccgt
atcgtcggctgctcccgggagatggtcggccgcgtgctgaagagcctggaggagcagggt
ctggtgcatgtgaagggcaagaccatggtggtgttcggcacccgctga
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