Pseudomonas citronellolis: PcP3B5_07340
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Entry
PcP3B5_07340 CDS
T04637
Symbol
birA
Name
(GenBank) Bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq00780
Biotin metabolism
pcq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
PcP3B5_07340 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcq03000
]
PcP3B5_07340 (birA)
Enzymes [BR:
pcq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
PcP3B5_07340 (birA)
Transcription factors [BR:
pcq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PcP3B5_07340 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
BPL_LplA_LipB_2
HTH_AsnC-type
HTH_1
HTH_24
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AMO74233
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Position
798747..799691
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AA seq
314 aa
AA seq
DB search
MQTLLKLLGDGRFHSGEELGAALGVSRSAVWKRLQGLESEFGLEVQSVRGRGYRLAEPLM
AIDPQQVRAPWPLDVLFSVDSTNAEVMRRLDAGAATPFAVVAERQTAGRGRRGRAWVSPF
GANLYCTLGISVRGGPKELEGLSLVVGLAVVRAIQSLGIAGVGLKWPNDILLGGKKLAGI
LLELTGDPADLCSVAIGIGINVNMRAAEGIDQPWTSLREAAGRPVDRNELLAALSRELEW
HLARHREQGFAASQREWESFHLWQGREVVLSTAAKHIVGRALGIDEQGALRLEVDGVESR
FSGGELSLRLSDDS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcagacattgctgaaactactgggcgatggacgattccattccggcgaggagctgggg
gcggcgctgggtgtcagccgtagtgccgtctggaaacgcctgcagggcctggagagcgag
ttcgggctggaggtgcaatccgtgcgcggccgtggctatcgcctggccgagccgttgatg
gccatcgatccgcaacaggtccgggcgccctggccgctggacgtgctgttctcggtcgac
tcgaccaatgccgaagtcatgcgccgcctggatgccggcgccgccacgcccttcgccgtg
gtggccgagcggcagacggcgggaagggggcggcgcgggcgcgcctgggtgagtccgttc
ggcgccaacctttattgcaccctgggcatctccgtgaggggagggcccaaggagctggaa
gggctgagtctggtcgtcggccttgccgtggtgcgcgccatccagtcgctcggcatcgcc
ggtgtcggcctgaagtggccgaacgacattctgctcggtggcaagaagctggccggcatt
ctcctggagttgaccggcgaccctgcagacctatgcagcgtggccatcggcataggcatc
aatgtgaacatgcgtgccgcggaaggcatcgaccagccctggacgtccttgcgcgaagcc
gcggggcgcccggtggatcgcaacgaactgctcgccgcgctgagccgggaattggagtgg
cacctggcccgtcatcgcgagcagggctttgcggccagccagcgggagtgggagtccttc
cacctgtggcaggggcgcgaagtcgtgctttcgaccgcggccaagcacatcgtcggtcgc
gccttggggatcgacgagcagggggcgttgcgcctcgaggtcgatggcgtggaaagccgc
ttcagcgggggcgagttgagtctgaggttgtctgatgattcttga
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integrated database retrieval system